Pairwise Alignments

Query, 895 a.a., Regulatory protein, LuxR:Tetratricopeptide TPR_4 from Variovorax sp. SCN45

Subject, 833 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 79.0 bits (193), Expect = 1e-18
 Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 44/287 (15%)

Query: 615 LAFHAGDIDAAFQALTELEYLGHHRQLPRVVAGAKL--ERSRMLLLQGNGPASRDELARA 672
           LA + GD   AF  L + E L   RQ+P  V  A L        L QG    + + + R 
Sbjct: 583 LAANRGDYAQAFVQLRDAERLMQQRQVPDTVYRAVLLLVSGHFWLQQGRAELTVEAVRRV 642

Query: 673 DDPALWDREKRQRLPAHDLDYMALARARWDIAFGDAR-AALDVLDAELHTALASAHNRRA 731
               L      Q   A       + R  + +   + R    D   A L   L +AH R  
Sbjct: 643 ----LRHFRGPQAKQAPPATLELVPRLEYLLVLAEVRLGGADQPVARLTALLETAHQRGM 698

Query: 732 L----KLRVLRALALQAAGDTAAAVREIETVLQAASQEGFVRLILDEGPAVGTLVHRYAL 787
           L    +LR++        GD A A R ++T L+ A++    + I +              
Sbjct: 699 LCLETELRLVLGEVAWQVGDCALARRSLQTGLELAARCQVQQAIREL------------- 745

Query: 788 SAQDAPAARGDPILADYLQRLLQLAGPMPAAEPESPATGADAMKEPLTRKEIRVLQLLAE 847
                   R   +L++               EP++P +GA  ++ PL+++E+ VLQL+A 
Sbjct: 746 ------RLRSPGLLSEL------------GMEPQAPVSGA--VESPLSQRELEVLQLIAL 785

Query: 848 GYSNSAMAEKLFVSDSTVRTHLRNINMKLDAKSRTQAVAIARRLGVI 894
           G SN  +A++LF+S  TV+TH R I+ KL  + RTQAVA A+ LG++
Sbjct: 786 GNSNLEIADRLFISLHTVKTHARRIHSKLGVERRTQAVAKAKTLGLM 832



 Score = 68.2 bits (165), Expect = 2e-15
 Identities = 96/388 (24%), Positives = 158/388 (40%), Gaps = 55/388 (14%)

Query: 16  PAATATQVPRTAIREEIAAATVKLVLVRAPAGFGKTTAMAQIRERMEAQGIATAWLTLDR 75
           P  +A  + R  + E + AA V++ L+ APAG GK+   A+       +     WL L  
Sbjct: 15  PRLSAHHLLRPRLAEPLLAAQVRVKLLCAPAGSGKSALFAEC-ALQAPKDCPVHWLPL-- 71

Query: 76  ADNDVSRF-LDCLAEAAQRLGVEEPRANGPF----DAVAALAAHDAPFTLFLDDFEVVQE 130
             N ++   LD     AQ L +       PF      ++ LA   AP  +FLDDF  +  
Sbjct: 72  --NGIALSPLDLCQRLAQNLDL-------PFIDEATLLSDLARWQAPAWVFLDDFCRLPA 122

Query: 131 PAVLGLVREIVEHLPRRGQLVIGSRGLPDLGLGRLRARGQLIEIDTDRLRFSLEETSAFF 190
           P    L+  +           +G+R  P     RL    +L+E   D L FS  E     
Sbjct: 123 PDTDALLDRLFTASSPALTWWLGTRRRPLCNWPRLLLDDELLECGAD-LAFSPVE----- 176

Query: 191 GLRMAHAKQALQTLPAELLSQLHRKTEGWVAAIWLASMALERHGTETGFVERFSGSDRAV 250
                  +Q L   P + + Q+ + + GW A    A +AL   G            ++ +
Sbjct: 177 ------IQQLLTHAPGQSVDQVLQFSAGWCAG---ARIALLGDG----------HPEKTL 217

Query: 251 ADYLAEDVLAHQPPDIRDFLLRTSILRQLDASVCQALCPRADCAAILERLAASNLFLTPV 310
            DYL  ++ +  PP++ +     + L + +A +C+ L    D    L  L A   F+ P 
Sbjct: 218 LDYLQHELFSTLPPELAEAWRVLAHLPRFNAGLCEHLFGFGDGDQYLHDLQALGAFIQP- 276

Query: 311 SGDGADSAW-RYHSLFADFLRARLAHEQPGETAR-LHLSAAGWYESHDRPVPAIDHAIEG 368
                D+ W +     AD LR     ++P    R  H  A  W+ +      A +HA+  
Sbjct: 277 ---WEDTEWLQVFPPLADLLR-----DEPWPAKRSWHRRACQWFTAEQDWQAAFEHALLA 328

Query: 369 GDHPYALALLDSYAAQ--FLEQGRMRML 394
            ++  A++LL  ++ +  F +Q  M +L
Sbjct: 329 EEYEVAVSLLQHFSFEDLFRQQNAMLLL 356