Pairwise Alignments

Query, 895 a.a., Regulatory protein, LuxR:Tetratricopeptide TPR_4 from Variovorax sp. SCN45

Subject, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

 Score =  227 bits (579), Expect = 2e-63
 Identities = 251/916 (27%), Positives = 390/916 (42%), Gaps = 87/916 (9%)

Query: 23  VPRTAIREEIAAATV-KLVLVRAPAGFGKTTAMAQIRERMEAQGIATAWLTLDRADNDVS 81
           VPR  + + + A    +L+LV APAGFGK++   +  E +      + WL L + D D  
Sbjct: 32  VPRLRLCQRLEAGLGGRLLLVNAPAGFGKSSLAIEFCETLPEHW-RSLWLGLSQRDADPG 90

Query: 82  RFLD---------CLAEAAQRLGVEEPRA-----------NGPFDAVAALAAHDAPFTLF 121
           RFL+         C A   Q +G+ + R            +G  D +A     D P  L 
Sbjct: 91  RFLERLLEGLQQYCPALGGQAMGLLKMRQRHQPFAFEEWLDGLLDELALYLQADTPLLLV 150

Query: 122 LDDFEVVQEPAVLGLVREIVEHLPRRGQLVIGSRGLPDLGLGRLRARGQLIEIDTDRLRF 181
           LDD+ + Q P +   ++  + HLP    L++ SR  P   L RLR   QL+E++   LR 
Sbjct: 151 LDDYHLAQGPVLDRCLQFFLNHLPPGLVLLVTSRQRPGWHLARLRLSRQLVELNEQDLRL 210

Query: 182 SLEETSAFFGLRMAHAKQALQTLPAELLSQLHRKTEGWVAAIWLASMALERHGTETGFVE 241
           + +E+ A  G +          L  + L  L ++++GWVA +    +A      E    +
Sbjct: 211 TADESLAVIGRQPTG-------LRGQALDNLIQRSDGWVAGLRFWQLAASDSADEQALPQ 263

Query: 242 RFSGSDRAVADYLAEDVLAHQPPDIRDFLLRTSILRQLDASVCQALCPRADCAAILERLA 301
              G +  + DYL E+V+   P D++ FL  T+   +  A +C A+  R D AA+L  L 
Sbjct: 264 ALHGGEGLIRDYLLEEVIDRLPADVQAFLDETACQERFCAPLCDAMRGRHDSAAVLSFLQ 323

Query: 302 ASNLFLTPVSGDGADSAWRYHSLFADFLRARLAHEQPGETARLHLSAAGWYESHDRPVPA 361
           A  +FL P+   G    +RYH LF+D LR+R A E       LHL A  W+E+ D    A
Sbjct: 324 AHQVFLVPLDEHG--HWFRYHHLFSDLLRSRQASE---SQVALHLRACRWFEAQDLLDEA 378

Query: 362 IDHAIEGGDHPYALALLDSYA-AQFLEQGRMRMLARWFSAIPEHQLREHPFLQPIALWA- 419
           ++ A+  G    A  L+ S +  Q L +  + ML RW   +P+  L   P L  +  WA 
Sbjct: 379 VEQALRAGHLDVAADLVQSLSEEQLLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWAL 438

Query: 420 --TCFTHGPWEAMRMLEQSGCLDSPIAEVRASAHTLVPLLLAMQDRHDEAYEIG--RQSL 475
              C      E    L +     S  A+    A  L    +  + R D    +    ++L
Sbjct: 439 GLACQLDAAEELAGYLSRFLPAPSATAQKSMLAQWLALSGVIARGRGDRERTLAYCGEAL 498

Query: 476 ARLPTGLPFADSVLLNAMAHILAVRGDQHEA----RRMLEAARERGSSTFNRMYTESLAG 531
             LP+       V L+ ++++    GD   A    R  LE A+  G+  F  +     A 
Sbjct: 499 QSLPSKRYGQRLVCLSTLSNLAIADGDFWRARGWNREALELAQRVGNPLFEALAHYDRAR 558

Query: 532 LFDLH-EGRLRQATARLRMAVDSTHAVSYNHSHGNAWAGVLYAGAVYETN-QLVQAEHLL 589
           +  LH  G + +A   +R  +     +S    +       LY G +  +  Q  Q    L
Sbjct: 559 V--LHARGEVLRALDEVRQGLQRLQGLSAQRLYAVRARLTLYEGYLLVSRLQPAQGRARL 616

Query: 590 NVYLPLA---RDVGLPDHMILSHVMRSRLAFHAGDIDAAFQALTELEYLGHHRQLPRV-- 644
              L  A   RD+     +++ H + + L    G    AF  L E E L H   +P V  
Sbjct: 617 RAGLGEARACRDIS----VLIGHCVIATLDGREGHFAEAFAELAEAERLMHIWDVPPVYY 672

Query: 645 VAGAKLERSRMLLLQGNGPASRDELAR------ADDPALWDREKRQRLPAHDLDYMALAR 698
           +A   L +  + L QG    +   L R       + PA    E    LP H    +AL +
Sbjct: 673 LAMITLVKCELWLAQGRTDLAESWLQRLGQTYGGEQPAA-APEFHPLLPLH----IALQQ 727

Query: 699 ARWDIAFGDARAALDVLDAELHTALASAHNRRALKLRVLRALALQAAGDTAAAVREIETV 758
           A  D     +  A+  L   +    AS      +         L   G    A + + ++
Sbjct: 728 AALDRIQLRSDDAVQRLACLVKRGQASGGMMLTVSALSQWLALLLDEGKEGQAAQLLPSL 787

Query: 759 LQAASQEGFVRLILDEGPAVGTLVHRYALSAQDAPAARGDPILADYLQRLLQLAGPMPAA 818
           L+AA   G ++      P    L        +   A    P+ A+ L+ L     P+P A
Sbjct: 788 LEAA-HGGVMQ------PMQPLLEKHPQWLQEQLQAGAACPVQAELLKHL----PPVPIA 836

Query: 819 EPESPATGADAMKEPLTRKEIRVLQLLAEGYSNSAMAEKLFVSDSTVRTHLRNINMKLDA 878
              S   G     E L+ +E+ VL+L+A+G SN  ++E+LF+S  TV+TH  +IN KL  
Sbjct: 837 ---STGNG-----EALSGREMAVLELIAQGCSNQQISERLFISLHTVKTHASHINSKLGV 888

Query: 879 KSRTQAVAIARRLGVI 894
           + RTQAVA A+ LG++
Sbjct: 889 ERRTQAVAKAKSLGLL 904