Pairwise Alignments

Query, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

 Score =  250 bits (638), Expect = 1e-70
 Identities = 159/530 (30%), Positives = 278/530 (52%), Gaps = 25/530 (4%)

Query: 1   MFLTQPLHKGRREKGKAAAVVCGDTRLDFAGFTDRVARLGAVLRQLGMRPGDRVGMMSLN 60
           + + + L  G R +     V     RL +    +R+ARL  VL + G++ GD V +M  +
Sbjct: 18  LLIKRLLMSGSRYEKTREIVYRDQMRLTYPQLNERIARLANVLTEAGVKAGDTVAVMDWD 77

Query: 61  SHRFVEYFFGTWWGGGVINPVNIRWNPKEVAYSLDDCDTRILLVDDVFAPMAAELRGLSS 120
           SHR++E  F     G V++ +N+R +P+++ Y+++  + R++LV+  F  +   + G  +
Sbjct: 78  SHRYLECMFAIPMIGAVVHTINVRLSPEQILYTMNHAEDRVVLVNSDFVGLYQAIAGQLT 137

Query: 121 SLRTVVYCGDG----AVPEGMVG-YEALLAATDPAEDAPH-DSDELAAVMYTGGTTGQPK 174
           ++   +   DG    A   G+VG YE LLAA  P  D P  D + +A   YT GTTG PK
Sbjct: 138 TVDKTLLLTDGPDKTAELPGLVGEYEQLLAAASPRYDFPDFDENSVATTFYTTGTTGNPK 197

Query: 175 GVMLTHGSLCINAL------GTVAALPRDTQDAAAIVAAPMFHVAGCGVALQSLMRLVPV 228
           GV  +H  L ++ L      G++ ++     +   +   PMFHV   G+   + M  +  
Sbjct: 198 GVYFSHRQLVLHTLAEASVTGSIDSVRLLGSNDVYMPITPMFHVHAWGIPYAATMLGMKQ 257

Query: 229 HVVPVFDELAVLRTLQSARITEMFLVPTMIKRVIEHPRFAEFDLSSLRLLSYGAAPIDAA 288
                ++   +++  +  ++T    VPT+++ ++  P     D    +++  G + ++ +
Sbjct: 258 VYPGRYEPDMLVKLWREEKVTFSHCVPTILQMLLNCPNAQGQDFGGWKII-IGGSSLNRS 316

Query: 289 LLDQAMRAFPGTAFAQVYGMTELSPVVTA--LPSHCHAPGPDRERLLR-SAGTPIPIAEL 345
           L   A+    G      YGM+E  P+++A  L     A   D     R  AG P+P+ E 
Sbjct: 317 LYQAALAR--GIQLTAAYGMSETCPLISAAHLNDELQAGSEDERVTYRIKAGVPVPLVEA 374

Query: 346 RIVDGDDNEVPF-GQV-GEIVARGPMVMKGYWNKPKETEAALRGGWMHTGDGGYMDEEGF 403
            IVDG+ N +P  G+  GE+V R P +  GY+ +P+++E   +GGW+HTGD   +D  G+
Sbjct: 375 AIVDGEGNFLPADGETQGELVLRAPWLTMGYFKEPEKSEELWQGGWLHTGDVATLDGMGY 434

Query: 404 VFVVDRMKDMIVSGGENVYSAEVENAIAQLPQVLMSAVIGVPDDKWGERVHAVIVRREGM 463
           + + DR+KD+I +GGE V S ++E+ I++ P V   AV+GV D +WGER  A++V R+G 
Sbjct: 435 IDIRDRIKDVIKTGGEWVSSLDLEDLISRHPAVREVAVVGVADPQWGERPFALLVARDGH 494

Query: 464 ALEAEAVIAHCRE-----QIAGYKCPRSVEFRDALPLSAAGKLQKFQLRE 508
            ++A+A+  H +       I  +  P  +     +P ++ GKL K ++R+
Sbjct: 495 DIDAKALKEHLKPFVEQGHINKWAIPSQIALVTEIPKTSVGKLDKKRIRQ 544