Pairwise Alignments

Query, 370 a.a., Alpha-methylacyl-CoA racemase (EC 5.1.99.4) from Variovorax sp. SCN45

Subject, 406 a.a., CoA-transferase from Pseudomonas simiae WCS417

 Score =  110 bits (276), Expect = 5e-29
 Identities = 120/411 (29%), Positives = 172/411 (41%), Gaps = 52/411 (12%)

Query: 3   GPLQGLRVIEMAGIGPGPFCAMLFADMGAEVLRIERPG--------------------TR 42
           G L  LRV++++ +  GP+   + AD+GAEV+++ERPG                    T 
Sbjct: 2   GALSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGSGDDTRAWGPPFLKDAYGENTS 61

Query: 43  TAPHDILA-RGRSTLQVDLRAAGAAQQVLDAIDKADVLIEGFRPGVMERLGLGPAPCHER 101
            A + + A R + ++ +D         V +   K+D+LIE F+ G +   GL      E 
Sbjct: 62  EAAYYLSANRNKQSVTIDFTRPEGQALVRELAAKSDILIENFKVGGLAAYGLDYESLKEI 121

Query: 102 NPRLVYGRMTGWGQHGPLAHAAGHDINYIAISGALHAIGRA----GEPPVPPLNYVGDFG 157
           NP L+Y  +TG+GQ GP A  AG+D     + G +   GR     G  PV     + D  
Sbjct: 122 NPELIYCSITGFGQTGPYATRAGYDFMIQGLGGLMSLTGRPEGDDGAGPVKVGVALTDIL 181

Query: 158 GGAMLLAFGILAALHEAKQSGRGQVVDAAMTD-GAALLSAMMYGFKSAGQWSNQRGE--- 213
            G +     ILAAL      G GQ +D A+ D   A L+     + + G    + G    
Sbjct: 182 TG-LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGASPKRLGNAHP 240

Query: 214 NMLDGGAHFYDTYACADGKHVAVGAIEPQF--YALMRERCGIADDPAFDAQ--MDADRWP 269
           N++      Y  +  ADG  +     + QF  +A +  +   ADDP F       A+R  
Sbjct: 241 NIVP-----YQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFSTNKVRVANRAE 295

Query: 270 VLKL-RMADIFRTRTRDEWCVLLEGSDACFAPVLDWDEAPAHPHNVARG-----TFASVG 323
           ++ L R A +F+T    EW   LE       P+ D  +  A P   ARG       A  G
Sbjct: 296 LIPLIRQATVFKTTA--EWVSQLERVGVPCGPINDLAQVFADPQVKARGLAMALPHALAG 353

Query: 324 GVVQPAPAPRFSRTAPV----MPPAAAHDDGPALLRRWGAAAEAVAPPGAS 370
            V Q A   R S+T PV     PP         L    G A   VA   AS
Sbjct: 354 MVPQVASPIRLSKT-PVEYRNAPPLLGEHTAQVLQDVLGLAGVNVAALKAS 403