Pairwise Alignments

Query, 370 a.a., Alpha-methylacyl-CoA racemase (EC 5.1.99.4) from Variovorax sp. SCN45

Subject, 396 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  110 bits (274), Expect = 9e-29
 Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 28/262 (10%)

Query: 3   GPLQGLRVIEMAGIGPGPFCAMLFADMGAEVLRIERPG---TRTAP---------HDILA 50
           G L G+RV++   +  GP+C  L AD+GAEV++IE      TR+ P         +  L 
Sbjct: 10  GALTGIRVLDFTFVMSGPYCTRLMADLGAEVIKIESKHGDLTRSRPPFRDGRSSYYASLN 69

Query: 51  RGRSTLQVDLRAAGAAQQVLDAIDKADVLIEGFRPGVMERLGLGPAPCHERNPRLVYGRM 110
            G+ ++ +DL++  A   V D + +ADV++E FRPGVM+RLGLG     E NPRLVY  +
Sbjct: 70  CGKRSIVLDLKSPEARDIVHDMVRQADVVVENFRPGVMKRLGLGYETLSEINPRLVYCSI 129

Query: 111 TGWGQHGPLAHAAGHDINYIAISGALHAI-GRAGEPPVPPLN--YVGDFGGGAMLLAFGI 167
           +G+GQ         +     A+SG   A+ G   +   PP    +V D  GG++    GI
Sbjct: 130 SGFGQGKSGDGKGAYAPTLHALSGFDDAMRGYQDDASRPPNTGIFVADVLGGSLAFG-GI 188

Query: 168 LAALHEAKQSGRGQVVDAAMTDGAALLSAMMYGFKSAGQWSNQRGENMLDGGAHF-YDTY 226
            AAL + +++GRG +VD ++ D    L     G     Q+  Q          HF Y   
Sbjct: 189 QAALVQRQRTGRGDLVDLSLLDSMVSLLVCEVG---EAQFPEQ--------PLHFVYKPT 237

Query: 227 ACADGKHVAVGAIEPQFYALMR 248
              DG  V     +  F AL R
Sbjct: 238 PARDGHLVVAPTTQDNFVALCR 259