Pairwise Alignments

Query, 398 a.a., Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) from Variovorax sp. SCN45

Subject, 378 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  106 bits (264), Expect = 1e-27
 Identities = 110/403 (27%), Positives = 175/403 (43%), Gaps = 57/403 (14%)

Query: 12  FRDEVRDFLARELTPELRAAGRRCSGIFSDYEYGNR--WHRILAARGWSVPHWPVEHGGT 69
           FR+ VR FL ++  P          G +    Y +R  W++   A G    H P E+GG 
Sbjct: 14  FRESVRTFLEKDAAP--------FHGHWEKQGYIDRRLWNKAGEA-GMLCSHLPEEYGGL 64

Query: 70  GWTPMQHYLFASELAAADAPPRA-PMGPGMVAPVIIAFGTEAQKRAWLPGIRSGEDYWCQ 128
           G   +   +   E++          +   +VAP I+ +G+EA K  +LP + SGE     
Sbjct: 65  GADFLYSAVVIEEISRLGLTGIGFSLHSDIVAPYILHYGSEALKHKYLPKLISGEMVTAI 124

Query: 129 GYSEPQSGSDLASLQCKAVRDGNDYVINGTKIWTTHAQYANRMFCLVRT--ASGGKPQQG 186
             +EP +GSDL  ++  AV DG++YVING+K + T+   A  +  + +T   +G K   G
Sbjct: 125 AMTEPGAGSDLQGVKTTAVLDGDEYVINGSKTFITNGYLAELVIVVAKTDPKAGAK---G 181

Query: 187 ISFLCFDIPTPGITIRPIISISG--DHELNQVFFDDVRVPAEGLIGEENQGWTIAKYLLQ 244
            S    +  TPG      +   G    + +++FF DVRVP E L+G+   G+    YL+Q
Sbjct: 182 TSLFLVEADTPGFDKGKRLEKVGMKAQDTSELFFQDVRVPKENLLGQAGMGFA---YLMQ 238

Query: 245 HERGGAWAPMLRARLRRLGAAADAAFAAG-----TRNHDEAG-------DMALRLAEMDC 292
                   P  R  +  +GA + A  A       TR     G       +   +LAEM  
Sbjct: 239 E------LPQERLTV-AIGALSSAEAALEWTLEYTRERKAFGKAIADFQNTRFKLAEMAT 291

Query: 293 AIDALEATELQSLRAQARGEPHGIRPSMGKVLGSELRQRLTELGVEIAGHYAAASLPLDD 352
            I        + +     G+      +M K   ++L+ ++ +  V++ G Y         
Sbjct: 292 EIQIGRVFVDKCMALHLEGKLDVPTAAMAKYWATDLQCKVLDECVQLHGGY--------- 342

Query: 353 GLGGELPIPEEAVFSMSAYLNDRAASIYAGSNEVQRNIVASHL 395
           G   E PI         A+ + R   IYAG+NE+ + I+A  L
Sbjct: 343 GFMWEYPIAR-------AWADARVQRIYAGTNEIMKEIIARAL 378