Pairwise Alignments

Query, 398 a.a., Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) from Variovorax sp. SCN45

Subject, 385 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  122 bits (307), Expect = 1e-32
 Identities = 112/388 (28%), Positives = 170/388 (43%), Gaps = 30/388 (7%)

Query: 11  AFRDEVRDFLARELTPELRAAGRRCSGIFSDYEYGNRWHRILAARGWSVPHWPVEHGGTG 70
           A R  VR F+ RE+ P + A  +  +G F  +E   +    L   G S P    + GG G
Sbjct: 9   ALRRTVRAFVDREINPHVDAWEK--AGRFPIHEIFRKAGD-LGLLGISKPE---KFGGMG 62

Query: 71  WTPMQHYLFASE---LAAADAPPRAPMGPGMVAPVIIAFGTEAQKRAWLPGIRSGEDYWC 127
                  + A E   +     P    +   M  P +  FG++  +  +L    SGE   C
Sbjct: 63  LDYSYSIVAAEEFGTIRCGGIPMSIGVQTDMCTPALARFGSDELRDEFLRPAISGEQVGC 122

Query: 128 QGYSEPQSGSDLASLQCKAVRDGNDYVINGTKIWTTHAQYANRMFCLVRTASGGKPQQGI 187
            G SE  +GSD+A L+  A +DG+DYVING+K+W T++  A+   CL+   S  KP    
Sbjct: 123 IGVSETGAGSDVAGLKTHARKDGDDYVINGSKMWITNSPSAD-FICLLANTSDDKPHINK 181

Query: 188 SFLCFDIPTPGITIRPIISISGDH--ELNQVFFDDVRVPAEGLIGEENQGWTIAKYLLQH 245
           S +   + TPGI++ P +   G H  E  QVFFDDVRVP    IG E  G+ +     Q 
Sbjct: 182 SLIMVPMNTPGISVSPPLEKLGMHSSETAQVFFDDVRVPQRNRIGHEGAGFMMQMLQFQE 241

Query: 246 ERGGAWAPMLRARLRRLGAAADAAFAAGTRNHDEAGDMAL--RLAEMDCAIDALEATELQ 303
           ER    A M++     + +  D      T       +  +  RLAE+   I+ L A   Q
Sbjct: 242 ERLFGAANMIKGLEHCIDSTIDYCKERQTFGKALIDNQVIHFRLAELSTEIECLRALVYQ 301

Query: 304 SLRAQARGEPHGIRPSMGKVLGSELRQRLTELGVEIAGHYAAASLPLDDGLGGELPIPEE 363
           +     +G+      SM K+    L + +++  ++  G           G+G     P  
Sbjct: 302 ATEQYIKGQDVTRLASMAKLKAGRLGREVSDSCLQYWG-----------GMGFMWDNP-- 348

Query: 364 AVFSMSAYLNDRAASIYAGSNEVQRNIV 391
                 AY + R  SI  G++E+   I+
Sbjct: 349 ---VARAYRDVRLVSIGGGADEIMLGII 373