Pairwise Alignments

Query, 398 a.a., Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) from Variovorax sp. SCN45

Subject, 386 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  108 bits (269), Expect = 3e-28
 Identities = 110/406 (27%), Positives = 177/406 (43%), Gaps = 35/406 (8%)

Query: 1   MAWTLSAAETAFRDEVRDFLARELTPELRAAGRRCSGIFSDYEYGNRWHRILAARGWSVP 60
           M + LS  +    D VR F+A+EL P   A  R  +      E   +      A G+   
Sbjct: 1   MNFQLSQEQDMLVDAVRSFVAKELLPHEEAVDRADA---VSPELAAQIRDKAIAAGFYAF 57

Query: 61  HWPVEHGGTGWTPMQHYLFASELAAADAPPRAPMGPGMVAPVIIAFGTEAQKRAWLPGIR 120
           + P E GG G   +   L   EL+         +        I+   T +Q   +L    
Sbjct: 58  NMPEEVGGGGLDYLSQALIERELSKVSWALHVFVAR---PSKILMACTGSQIGDYLLPCV 114

Query: 121 SGEDYWCQGYSEPQSGSDLASLQCKAVRDGNDYVINGTKIWTTHAQYANRMFCLVRTAS- 179
            G+   C   +EP +GSD  +++ +AVR G+D+VING+K + +HA +A+       T + 
Sbjct: 115 QGKKVDCFALTEPGAGSDANAIKTRAVRSGDDFVINGSKHFISHAGHADFAIVFAVTDTY 174

Query: 180 --GGKPQQGISFLCFDIPTPGITIR---PIISISGDHELNQVFFDDVRVPAEGLIGEENQ 234
              G+ +  ++    D  TPG+TIR     +S  G H   ++FFDD RVPA  ++GE  +
Sbjct: 175 EHNGRQRNAVTSFLVDRGTPGMTIRRGPKCVSNRGYHTY-EMFFDDCRVPASKVLGEVGK 233

Query: 235 GWTIAKYLLQHERGGAWAPMLRARLRRLGAAADAAFAAGTRNHDEA----GDMALRLAEM 290
           GW +A   L   R    A  +    R L  +    +AA  +   +       ++ +LA+M
Sbjct: 234 GWEVANAWLTAGRVMVAANCVGQAQRALDVSLQ--WAADRKQFGQPIGTYQGVSFKLADM 291

Query: 291 DCAIDALEATELQSLRAQARGEPHGIRPSMGKVLGSELRQRLTELGVEIAGHYAAASLPL 350
              I A E   L +     +G        M K+  SE   ++ +  V+I G        +
Sbjct: 292 ATQIRAAELLTLHTAWKMDQGSMTDGEAGMAKLFASETLGKVADEAVQIFGGMGL----M 347

Query: 351 DDGLGGELPIPEEAVFSMSAYLNDRAASIYAGSNEVQRNIVASHLL 396
           D+G       P E +     + N R   I+ G++E+QR+I+A  LL
Sbjct: 348 DEG-------PVERI-----WRNARIERIWEGTSEIQRHIIARELL 381