Pairwise Alignments

Query, 398 a.a., Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) from Variovorax sp. SCN45

Subject, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score =  120 bits (301), Expect = 7e-32
 Identities = 106/394 (26%), Positives = 170/394 (43%), Gaps = 32/394 (8%)

Query: 5   LSAAETAFRDEVRDFLARELTPELRAAGRRCSGIFSDYEYGNRWHRILAARGWSVPHWPV 64
           L+A + A RD VRDF   EL P      R       ++ +    H+ LAA G      P 
Sbjct: 3   LNADQEAIRDAVRDFSQAELWPNAPKWDR-------EHSFPKEAHQGLAALGAYGICVPE 55

Query: 65  EHGGTGWTPMQHYLFASELAAADAPPRAPMGPGM--VAPVIIAFGTEAQKRAWLPGIRSG 122
           EHGG G   +   L   E+AA D      +      V  +++ +G   QK+ WL  +  G
Sbjct: 56  EHGGAGLDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKKQWLEPLAQG 115

Query: 123 EDYWCQGYSEPQSGSDLASLQCKAVRDGNDYVINGTKIWTTHAQYANRMFCLVRTASGGK 182
           +       +EPQ+GSD +SL+  A +DG+ YVI+G K + T  +   ++  ++     G 
Sbjct: 116 KMLGAFCLTEPQAGSDASSLRTTARKDGDAYVIDGVKQFITSGK-NGQVAIVIAVTDKGA 174

Query: 183 PQQGISFLCFDIPTPGITIRPIISISGDH--ELNQVFFDDVRVPAEGLIGEENQGWTIAK 240
            ++G+S        PG  +  +    G H  +  Q+ FD  R+P E LIG E +G+ IA 
Sbjct: 175 GKRGMSAFLVPTDAPGYNVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGYKIAL 234

Query: 241 YLLQHERGGAWAP---MLRARLRRLGAAADAAFAAGTRNHDEAGDMALRLAEMDCAIDAL 297
             L+  R G  A    M R+      A A    A G    D+   +  RLAE    ++A 
Sbjct: 235 GALEGGRIGIAAQSVGMARSAFDVALAYAKERQAFGGSIFDQQA-VGFRLAECATQLEAA 293

Query: 298 EATELQSLRAQARGEPHGIRPSMGKVLGSELRQRLTELGVEIAGHYAAASLPLDDGLGGE 357
                 +   +  G P     +M K+  SE+ +R+    ++  G Y         G   +
Sbjct: 294 RQLIWHAAALRDAGRPCLKEAAMAKLFASEMAERVCSAAIQTLGGY---------GYVND 344

Query: 358 LPIPEEAVFSMSAYLNDRAASIYAGSNEVQRNIV 391
            P+          Y + R   IY G++++Q+ ++
Sbjct: 345 FPLER-------IYRDVRVCQIYEGTSDIQKLLI 371