Pairwise Alignments

Query, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 352 a.a., ATP-dependent DNA helicase RuvB from Pseudomonas simiae WCS417

 Score =  464 bits (1193), Expect = e-135
 Identities = 231/336 (68%), Positives = 277/336 (82%)

Query: 14  RVVSAAPASPNEEAIERALRPKLLDEYVGQAKVREQLEIFIGAARKRKEALDHVLLFGPP 73
           R+++A      EE  +RA+RP  L EY+GQ  VREQ+E+FI AAR R E+LDH L+FGPP
Sbjct: 6   RLIAATGPRDREEVQDRAIRPLSLAEYIGQPTVREQMELFIQAARGRSESLDHTLIFGPP 65

Query: 74  GLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAALLTNLEPNDVLFIDEIHRLSPVVEE 133
           GLGKTTL++IIA E+GV+++ TSGPVLE+P DLAALLTNLEP+DVLFIDEIHRLSP+VEE
Sbjct: 66  GLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLSPIVEE 125

Query: 134 ILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFY 193
           +LYPA+ED+Q+DIMIGEGPAARSIKLDL PFTLVGATTRAGMLTNPLRDRFGIV RLEFY
Sbjct: 126 VLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFY 185

Query: 194 TPEELALIVRRSAGLLKVETDAAGGFEIARRSRGTPRIANRLLRRVRDYAEVKGNGRITE 253
           +  +LA IV RSA +L +  D  G FEIARR+RGTPRIANRLLRRVRD+AEV+  G IT+
Sbjct: 186 STADLATIVSRSASILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRAKGHITK 245

Query: 254 DIAHKALAMLDVDPQGFDLMDRKLLEAVIHRFDGGPVGLDNVAASIGEERDTIEDVIEPY 313
            +A  AL +LDVD  GFD  DR+LL  +I +FDGGPVG+D++AA+I EER TIEDV+EPY
Sbjct: 246 AVADLALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIEDVLEPY 305

Query: 314 LIQQGYLQRTPRGRIATLAAYRHLGVAPPSGRGDVP 349
           LIQQGY+ RTPRGR+ T  AY H G+  PS  G++P
Sbjct: 306 LIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRLGEMP 341