Pairwise Alignments

Query, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 440 a.a., recombination factor protein RarA from Pseudomonas simiae WCS417

 Score = 53.9 bits (128), Expect = 8e-12
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 21/152 (13%)

Query: 21  ASPNEEAIERALRPKLLDEYVGQAKVREQLEIFIGAARKRKEALD----HVLLF-GPPGL 75
           + P  + +   LR   LDEYVGQ       E  +   +  +EAL+    H ++F GPPG+
Sbjct: 6   SDPIAQPLAARLRSTNLDEYVGQ-------EHLLARGKPLREALEQGALHSMIFWGPPGV 58

Query: 76  GKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAALLT-------NLEPNDVLFIDEIHRLS 128
           GKTTL+ ++A     +  +T   VL   K++   +              +LF+DE+HR +
Sbjct: 59  GKTTLARLLAKVSDAHF-ETVSAVLAGVKEIRQAVEVAKQQAGQYGKRTILFVDEVHRFN 117

Query: 129 PVVEEILYPALEDYQIDIMIGEGPAARSIKLD 160
              ++   P +ED  + I IG      S +L+
Sbjct: 118 KSQQDAFLPYVEDGTL-IFIGATTENPSFELN 148