Pairwise Alignments

Query, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 437 a.a., Replication-associated recombination protein RarA from Sphingobium sp. HT1-2

 Score = 54.3 bits (129), Expect = 6e-12
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 13/136 (9%)

Query: 20  PASPNEEAIERALRPKLLDEYVGQAKVREQLEIFIGAARKRKEA--LDHVLLFGPPGLGK 77
           PA  +   +   LRP +L + VGQ    E L    GA  +   A  L  +L +GPPG GK
Sbjct: 12  PAGIDHAPLADRLRPAVLADVVGQ----EHLTGPDGAIGRMVAAGRLSSILFWGPPGTGK 67

Query: 78  TTLSHIIAAELGVNLRQTSGPVLEKPKDLAALLTNLEPN------DVLFIDEIHRLSPVV 131
           TT+S ++A  +G+     S  V     DL  +    + +       +LF+DEIHR +   
Sbjct: 68  TTISRLLADAVGMRFEPISA-VFSGVADLKKVFAAAKDHGRRGEKTLLFVDEIHRFNRAQ 126

Query: 132 EEILYPALEDYQIDIM 147
           ++   P +ED  + ++
Sbjct: 127 QDSFLPFVEDGTVTLV 142