Pairwise Alignments

Query, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

 Score =  459 bits (1180), Expect = e-134
 Identities = 229/333 (68%), Positives = 275/333 (82%)

Query: 18  AAPASPNEEAIERALRPKLLDEYVGQAKVREQLEIFIGAARKRKEALDHVLLFGPPGLGK 77
           AA     EE  +RA+RP  LDEY+GQ  VREQ+ +FI AAR R E+LDH L+FGPPGLGK
Sbjct: 9   AASGRDREEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHTLIFGPPGLGK 68

Query: 78  TTLSHIIAAELGVNLRQTSGPVLEKPKDLAALLTNLEPNDVLFIDEIHRLSPVVEEILYP 137
           TTL++IIA E+GV+++ TSGP+LE+P DLAA+LTNLEP+DVLFIDEIHRLSPVVEE+LYP
Sbjct: 69  TTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYP 128

Query: 138 ALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFYTPEE 197
           A+ED+Q+DIMIGEGPAARSIKLDL PFTLVGATTRAGMLTNPLRDRFGIV RLEFY  ++
Sbjct: 129 AMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYNDKD 188

Query: 198 LALIVRRSAGLLKVETDAAGGFEIARRSRGTPRIANRLLRRVRDYAEVKGNGRITEDIAH 257
           L+ IV RSA +L +  +  G +EIARR+RGTPRIANRLLRRVRDYAEV+G G+IT+ +A 
Sbjct: 189 LSTIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKGQITKAVAD 248

Query: 258 KALAMLDVDPQGFDLMDRKLLEAVIHRFDGGPVGLDNVAASIGEERDTIEDVIEPYLIQQ 317
            AL +LDVD +GFD  DR+LL  +I +FDGGPVG+DN+AA+I EER TIEDV+EPYLIQQ
Sbjct: 249 MALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDVLEPYLIQQ 308

Query: 318 GYLQRTPRGRIATLAAYRHLGVAPPSGRGDVPD 350
           GY+ RTPRGR+ T  AY H G+  P   G+  D
Sbjct: 309 GYIMRTPRGRVVTRHAYLHFGLNIPGRLGEGGD 341