Pairwise Alignments

Query, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 447 a.a., replication-associated recombination protein A from Dickeya dianthicola ME23

 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 55/263 (20%)

Query: 32  LRPKLLDEYVGQAKVREQLEIFIGAARKRKEALD-----HVLLFGPPGLGKTTLSHIIAA 86
           +RP  L +Y+GQ  +       +G  +    A++      ++L+GPPG GKTTL+ +I  
Sbjct: 20  MRPVTLAQYIGQQHL-------LGPGKPLPRAIEAGQLHSMILWGPPGTGKTTLAELIGR 72

Query: 87  ELGVNLRQTSGPVLEKPKDLAALLTNLEPN------DVLFIDEIHRLSPVVEEILYPALE 140
               ++ + S  V    K++   +     N       +LF+DE+HR +   ++   P +E
Sbjct: 73  YGHADVERISA-VTSGIKEIREAIERARQNRDAGRRTILFVDEVHRFNKSQQDAFLPHIE 131

Query: 141 DYQIDIMIGEGPAARSIKLDLQPFTLVGATTR--AGMLTNPLRDRFGIVARLEFYTPEEL 198
           D  I                    T +GATT   +  L + L  R   V  L+  + E++
Sbjct: 132 DGTI--------------------TFIGATTENPSFELNSALLSR-ARVYLLKALSAEDI 170

Query: 199 ALIVRRSAGLLKVETDAAGGFEIARRSRGTPRIANRLLRRVRDYAEVKGNGRITEDIAHK 258
             ++ ++   ++      GG +I       P    RLL  +     V G+ R + ++   
Sbjct: 171 EQVLEQA---MQDTERGLGGQQIV-----LPDETRRLLAEL-----VNGDARRSLNLLEM 217

Query: 259 ALAMLDVDPQGFDLMDRKLLEAV 281
              M +VD  G  L+   LL+ +
Sbjct: 218 MADMAEVDASGQRLLTLALLKEI 240