Pairwise Alignments

Query, 354 a.a., no description from Variovorax sp. SCN45

Subject, 367 a.a., Outer membrane protein (porin) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  126 bits (316), Expect = 1e-33
 Identities = 116/374 (31%), Positives = 159/374 (42%), Gaps = 46/374 (12%)

Query: 1   MKKTVAAGLVLAAYSSLTPAQSSVTIYGTVDLYMAFAKS----GITSSK-----RLEDGG 51
           MKKT  A     A +    AQS+VT+YG VDLY+  + +    G T+ K      L  GG
Sbjct: 20  MKKTAVALAAFGALAGAAHAQSNVTLYGLVDLYVGKSTTKATFGSTTLKVNPGMSLISGG 79

Query: 52  QTASRLGFRGTEDLGGGLSAHFTLESGFAPDTGNGTLPGPAMSFSRQSFVGLSGPWGQID 111
              SR G RG+EDLGGGL   F LESGF    G G        F+R S VGL+G +G  +
Sbjct: 80  LNGSRWGVRGSEDLGGGLKTTFQLESGFDASNGVGN-----AGFNRTSKVGLTGGFGSFE 134

Query: 112 AGRMYTPMFYTLFKADPYG------VNSVFSPINLVAATDAQPGLTPFAARASNMIRYRT 165
            GR YT MF  +   D  G       N++F P  L AA     GL+P A R  NM++Y T
Sbjct: 135 MGRQYTQMFLLMDGFDAQGTSSFSATNAIFGPPVLAAA----GGLSP-AVRRDNMLQYTT 189

Query: 166 PASSDFFADIAYAPGESSAPSHQSGNFYGGSLGWSRKPYYIAYAFQRARSGSASAPVADP 225
           P    F   + YA GE+ AP   SG+    S  ++  P      ++     +  AP A  
Sbjct: 190 PNMGGFTGVVQYAFGENGAPGISSGHAASLSALYADGPIAAQAVYE-----AVKAPGATG 244

Query: 226 AATTYQALSGAYELPDIGLQFYGNYVRNSSNLPR--VPTAKLASLGVTYNVTPVSNLMFE 283
           A      L  +Y+     ++    +V     L         + S+ V        N    
Sbjct: 245 ATAKSTGLGVSYDF--TAIKVLAQFVNQKDGLANGVKENGYVLSVAVPVGSAGSLNAGIG 302

Query: 284 AMQRKVDDTGRSQLAWT---LGYDYYLSKRTVLYARWLRLLNRNGASASLATIAVATDSG 340
               K   TG   +  T   + Y + LSKRT +YA        N     +A+  + T   
Sbjct: 303 TETMKAAATGTRIVKTTSASIEYRHDLSKRTTVYA------GLNNVKFEIASTPLFTSKD 356

Query: 341 NGVRVLATGIRHNF 354
              ++   G+RH F
Sbjct: 357 ---QLYGVGLRHKF 367