Pairwise Alignments

Query, 354 a.a., no description from Variovorax sp. SCN45

Subject, 406 a.a., Outer membrane protein (porin) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 108/374 (28%), Positives = 163/374 (43%), Gaps = 47/374 (12%)

Query: 7   AGLVLAAYSSLTPAQ-----SSVTIYGTVDL-YMAFAKSGITSSKRLEDGGQTASRLGFR 60
           AGL L A +    AQ     S V++YG +D  Y     +G  +  R++ G  +  R G R
Sbjct: 54  AGLALTAAAPQAFAQAPGGGSQVSLYGVLDGGYYRRNLAGEATVSRMDSGLLSMPRWGMR 113

Query: 61  GTEDLGGGLSAHFTLESGFAPDTGN-GTLPGPAMS---FSRQSFVGLSGPWGQIDAGRMY 116
           G+EDLGGGLSA F +   F  DTG  G  PG   +   FS  S+VGL G +G +  GR+ 
Sbjct: 114 GSEDLGGGLSAAFDIGGHFRMDTGEAGRHPGDTAAGRQFSLASWVGLRGGFGFVRMGRIP 173

Query: 117 TPMFYTLFKADPYGVNSVFSPINLVAATDAQPGLTPFAARA---SNMIRYRTPASSDFFA 173
           T  +    +  P+  +    P  +   T +QP      A     SN + Y TP      A
Sbjct: 174 TGSYIATLQFSPFAESVNLGPFLMHTITGSQPMNAVNGATDGIWSNSVAYTTPTFGGLSA 233

Query: 174 DIAYAPGESSAPSHQ---SGNFYGGSLGWS---RKPYYIAYAFQRARSGSASAP-VADPA 226
           ++ Y   E+S    +   + N+  G+   +   R+    A    RA +  A AP V    
Sbjct: 234 NLQYVAREASTEGRRVDLTANYRQGAFAAALNHRRVDGAAITTPRAAAEPAGAPYVIQET 293

Query: 227 ATTYQALSGAYELPDIGLQFYGNYVRNSSNLPRVPTAKLASLGVTYNVTPVSNLMFEAMQ 286
            +T  ++S  +++    ++ +G Y   +     +    L +LG++  V   +  +  +  
Sbjct: 294 KSTLASVSYDFDV----VKVFGQYSTGTVQARGLREIDLDTLGLSAQVPVGAGRIVASWA 349

Query: 287 RK------VDDTGRSQLAWTLGYDYYLSKRTVLYARWLRLLNRNGASASLATIAVATDSG 340
           R       V D  RS L  + GY + LSKRT LY              ++A  A    SG
Sbjct: 350 RTKREQAGVSDRVRSTL--SAGYIHSLSKRTDLY------------GVAIADRATNLRSG 395

Query: 341 NGVRVLATGIRHNF 354
            G   LA GIRH+F
Sbjct: 396 TG---LALGIRHSF 406