Pairwise Alignments

Query, 190 a.a., Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 206 a.a., Holliday junction ATP-dependent DNA helicase RuvA from Xanthobacter sp. DMC5

 Score =  123 bits (309), Expect = 2e-33
 Identities = 81/206 (39%), Positives = 109/206 (52%), Gaps = 16/206 (7%)

Query: 1   MIGKLTGTLAERNPPQVVVDCNGVGYEVDVPMSTFYNLPNVGAKVSLLTHFVVREDAQIL 60
           MIGKL G + E N    ++D +GVGY V     T   LP  G   +L     VREDA  L
Sbjct: 1   MIGKLKGVVDELNEDHAIIDVHGVGYLVHCSGRTLSALPRAGEATALFIETHVREDAIRL 60

Query: 61  YGFGTAEERAAFRQLIKITGVGPRTALGLLSGMSVGELAQAITTQELGRLVKIPGIGKKT 120
           +GF +A ER  FR L  + G+G +TAL +LS ++  EL QAI   +   + + PG+G + 
Sbjct: 61  FGFASAAERDWFRLLQGVQGIGTKTALAVLSTLTASELTQAIALGDKTTVARAPGVGPRV 120

Query: 121 AERLLLELKGKLG---------ADIG---LPAHTASDAQADILQALIALGYSDKEA---- 164
           A R++ ELK K+          ADIG     A  A  A AD + AL+ LGY   +A    
Sbjct: 121 ATRIITELKDKMPGFGAGSVSLADIGGAPAAAPVAGGAAADAMSALVNLGYGAPQANAAI 180

Query: 165 ALALKALPKDATVSEGIKLALKSLAK 190
           A AL++  +DA     I+L LK LAK
Sbjct: 181 AAALRSAGEDAKTETLIRLGLKELAK 206