Pairwise Alignments

Query, 190 a.a., Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 205 a.a., Holliday junction ATP-dependent DNA helicase RuvA from Pseudomonas putida KT2440

 Score =  189 bits (479), Expect = 4e-53
 Identities = 98/202 (48%), Positives = 137/202 (67%), Gaps = 14/202 (6%)

Query: 1   MIGKLTGTLAERNPPQVVVDCNGVGYEVDVPMSTFYNLPNVGAKVSLLTHFVVREDAQIL 60
           MIG+L GTLAE+ PP +++D NGVGYE++VPM+T Y LP VG  V++ TH VVREDA +L
Sbjct: 1   MIGRLRGTLAEKQPPHLIIDVNGVGYELEVPMTTLYRLPKVGETVTVHTHLVVREDAHLL 60

Query: 61  YGFGTAEERAAFRQLIKITGVGPRTALGLLSGMSVGELAQAITTQELGRLVKIPGIGKKT 120
           YGF    ER  FR+LI++ GVGP+ AL L+SG+ V EL + +  Q+   LV++PG+GKKT
Sbjct: 61  YGFAEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSALVRVPGVGKKT 120

Query: 121 AERLLLELKGK------------LGADIGLPAHTASDAQADILQALIALGYSDKEAALAL 168
           AERLL+ELK +            L +D  LP  + S A+AD + AL++LGY  +EA+ A+
Sbjct: 121 AERLLVELKDRFKAWETSPAMFTLVSDGPLPVASESSAEADAVSALVSLGYKPQEASKAI 180

Query: 169 KALPKDATVS--EGIKLALKSL 188
            A+   A +S  E I+ +LK +
Sbjct: 181 AAIKDKAGLSSEELIRRSLKGM 202