Pairwise Alignments

Query, 416 a.a., Putative drug efflux protein from Variovorax sp. SCN45

Subject, 401 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 17/279 (6%)

Query: 67  VAFAIYAIALLISLLVAGSLSDHIGRRPVVLGALALQAVAMGLFLLAQDIGGLIVARVVQ 126
           +A + +  A  +  L+ G LSD IGRRPV++G L L  +A    LL  DI   I ARV+Q
Sbjct: 49  MALSAFVAAFGLGQLLFGPLSDRIGRRPVLIGGLVLYGLATLSMLLVDDIEHFIAARVLQ 108

Query: 127 GIATGVASGALSAAVVEAAPASRKRLGALITSVSPLAGLALGALLTGMAVKFS--VQPVM 184
           G+    A+  L+  VV     +       +T +  L  + +  ++ G+ +K+     P+M
Sbjct: 109 GLG-ACAALVLARTVVRDVWKAEAGPALALTMIGMLYAIVVAPMVGGLLIKWLGWRAPIM 167

Query: 185 LVFGVLAVVFALGAAVVLWMPET---VTRRPGAWASLVPRVSIPARARAEFARGLPVFIA 241
           L   + +VV  +   V+L+  E+   +  + G W SL  +     R R    R   V +A
Sbjct: 168 LALAIGSVVLLV---VLLFFRESNHYLDPKAGHWRSLGGQYLDLLRGRQ--YRAFAVALA 222

Query: 242 VWALGGLFLSLAPS--LMLHVFG---VDNGVVNGLTVAVLSGVGAIAPTLLGRLAAPRPA 296
               G +F  +A S  + +++ G   ++ G+  GL V++L          + RL   R  
Sbjct: 223 C-TYGAMFAVIAGSSAVFINLLGFSSLEYGINFGLIVSMLIVGSTYTRRNIMRLGPQRIV 281

Query: 297 IVGMASIAAGLVLLLASLATRSLALFFVGTAVAGVGFGG 335
            +G+A +AAG V  +   A   L++  +   +A V  GG
Sbjct: 282 TMGVAMVAAGGVSAVVIYALFGLSVLGLDIPIALVTLGG 320