Pairwise Alignments

Query, 416 a.a., Putative drug efflux protein from Variovorax sp. SCN45

Subject, 404 a.a., MFS transporter from Pseudomonas simiae WCS417

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 98/368 (26%), Positives = 152/368 (41%), Gaps = 26/368 (7%)

Query: 60  FSSSLLTVAFAIYAIALLISLLV--AGSLSDHIGRRPVVLGALALQAVAMGLFLLAQDIG 117
           F +S   V + + A  L I+ ++  AG L D  GRR  +L  L L AVA GL  +A  + 
Sbjct: 37  FDASFHAVQWVVLAYLLAITAVIVSAGRLGDRFGRRRSLLAGLLLFAVACGLCGMASSLA 96

Query: 118 GLIVARVVQGIATGV----ASGALSAAVVEAAPASRKRLGALITSVSPLAGLALGALLTG 173
            LI ARV+QG+   V    A G +   V +A       L   +++V    G ++G +L  
Sbjct: 97  WLIAARVLQGLGAAVMMAMALGMVGDTVTKARTGRVMGLLGTMSAVGTAMGPSVGGVLLS 156

Query: 174 MAVKFSVQPVMLVFGVLAVVFALGAAVVLWMPETVTRRPGAWASLVPRVSIPARARAEFA 233
           +    ++  V +  G++AV  A     V       +   G W SL  + +         A
Sbjct: 157 VWGWRAIFLVGVPLGLVAVALACCYLPVDRPHARSSAGSGFWPSL--KDASLRTGLVMSA 214

Query: 234 RGLPVFIAVWALGGLFLSLAPSLMLHVFGVDNGVVNGLTVAVLSGVGAIAPTLLGRLAAP 293
               V +A + +G  +LS    L     G+   V  G  VA ++GV   A  L  RL +P
Sbjct: 215 LVAAVIMATFVVGPFYLSRGLGLDPEWMGLVMAV--GPCVAAITGVP--AGRLTDRLGSP 270

Query: 294 RPAIVGMASIAAGLVLLLAS-----------LATRSLALFFVGTAVAGVG-FGGAFSALV 341
           R  + G+  +A G +LL  +           + T   +LF      A +G   GA    V
Sbjct: 271 RMTLAGLGMMACGALLLSCAWGLFVYLGALVILTTGYSLFQAANNTAVMGDVEGARRGTV 330

Query: 342 QTLAPLAQSHERGELFAAIFVVSYLAFSLPAMLAGFLVKPLGLLATVEGYAAVLLLIAVY 401
             L  L  S   G +  A  + +  A++ P +           L T    A  L+L+A  
Sbjct: 331 SGLLNL--SRNLGLIVGAWALGAVFAWASPDVTRALPQSVAYGLHTTFSVALGLILLASV 388

Query: 402 GVWNQWAA 409
             W ++AA
Sbjct: 389 MAWRRFAA 396