Pairwise Alignments

Query, 416 a.a., Putative drug efflux protein from Variovorax sp. SCN45

Subject, 397 a.a., MFS transporter from Pseudomonas simiae WCS417

 Score =  296 bits (758), Expect = 7e-85
 Identities = 161/387 (41%), Positives = 244/387 (63%), Gaps = 8/387 (2%)

Query: 33  LAAVLFGFFFAAAAPSPLFVVFQHAWHFSSSLLTVAFAIYAIALLISLLVAGSLSDHIGR 92
           LA  L  F  A++AP+PL+ ++Q   HFS+ +LT+ F +YA++LL++LL  GSLSDH+GR
Sbjct: 14  LAITLLTFLAASSAPTPLYHLYQEGLHFSAGMLTLIFGVYALSLLVALLTVGSLSDHLGR 73

Query: 93  RPVVLGALALQAVAMGLFLLAQDIGGLIVARVVQGIATGVASGALSAAVVEAAPASRKRL 152
           +PV+  AL L  +AM LF+    +  LI AR +QG ATG+A+  L AA+++    + ++ 
Sbjct: 74  KPVIFTALILNMLAMLLFINEGSVAWLIAARTLQGFATGMATAVLGAALLD----TDRQQ 129

Query: 153 GALITSVSPLAGLALGALLTGMAVKFSVQPVMLVFGVLAVVFALGAAVVLWMPETVTRRP 212
           G L+ SV+PL G+A GA+ + + V+F+  P  L++  L V+  L A  V  +PE+V+R P
Sbjct: 130 GPLVNSVAPLLGMACGAMGSSLLVEFAPLPTQLIYCTLFVLMLLQAVYVWRLPESVSRIP 189

Query: 213 GAWASLVPRVSIPARARAEFARGLPVFIAVWALGGLFLSLAPSLMLHVFGVDNGVVNGLT 272
           GA ASL P + +P +AR      LPV +AVWA+GG +LSLAPSL+    G  + ++ G  
Sbjct: 190 GALASLRPTLHVPPQARRALWLSLPVDVAVWAMGGFYLSLAPSLVRTATGSTSNLIGGGL 249

Query: 273 VAVLSGVGAIAPTLLGRLAAPRPAIVGMASIAAGLVLLLASLATRSLALFFVGTAVAGVG 332
           VAVL+  GA+    L    A +   +G   +A G+ L+L ++ + S+ LFF+ T +AG G
Sbjct: 250 VAVLTVSGALMIFTLRNRPADKVLRLGAGLLAVGVALILTAVHSASVLLFFIATLIAGSG 309

Query: 333 FGGAFSALVQTLAPLAQSHERGELFAAIFVVSYLAFSLPAMLAGFLVKPLGLLATVEGYA 392
           FG  F   ++++ PLA  HER  L +A +V+SYLAF LP++LAG L++  GL+ T +GY 
Sbjct: 310 FGAGFLGALRSVVPLALPHERAGLMSAFYVLSYLAFCLPSLLAGNLIRRFGLIVTTDGYG 369

Query: 393 AVLLLIAVYG----VWNQWAALRKAPG 415
           AVL+L+A+      +W   A  R   G
Sbjct: 370 AVLILLALGALVGLLWQDSARARATTG 396



 Score = 28.1 bits (61), Expect = 5e-04
 Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 17/188 (9%)

Query: 238 VFIAVWALGGLFLSLAPSLMLHVFGVDNGVVNGLTVAVLSGVGA----IAPTLLGRLA-- 291
           VF+A+  L  L  S AP+ + H++        G+ + ++ GV A    +A   +G L+  
Sbjct: 12  VFLAITLLTFLAASSAPTPLYHLYQEGLHFSAGM-LTLIFGVYALSLLVALLTVGSLSDH 70

Query: 292 -APRPAIVGMASIAAGLVLLLASLATRSLALFFVGTAVAGVGFGGAFSALVQTLAPLAQS 350
              +P I    ++   ++ +L  +   S+A       + G   G A + L   L  L   
Sbjct: 71  LGRKPVI--FTALILNMLAMLLFINEGSVAWLIAARTLQGFATGMATAVLGAAL--LDTD 126

Query: 351 HERGELFAAIFVVSYLAFSLPAMLAGFLVK--PLGLLATVEGYAAVLLLIAVYGVWNQWA 408
            ++G L  +  V   L  +  AM +  LV+  PL           ++LL AVY VW    
Sbjct: 127 RQQGPLVNS--VAPLLGMACGAMGSSLLVEFAPLPTQLIYCTLFVLMLLQAVY-VWRLPE 183

Query: 409 ALRKAPGA 416
           ++ + PGA
Sbjct: 184 SVSRIPGA 191