Pairwise Alignments

Query, 416 a.a., Putative drug efflux protein from Variovorax sp. SCN45

Subject, 483 a.a., Drug resistance transporter, EmrB/QacA family from Pseudomonas putida KT2440

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 92/378 (24%), Positives = 148/378 (39%), Gaps = 49/378 (12%)

Query: 24  LPASVAFPLLAAVLFGFFFAAAAPSPLFVVFQ--HAWHFSSSLLTVAFAIYAIALLISLL 81
           LP +    +L A++   F  A   + + V      A      LL    + Y +A+ +++ 
Sbjct: 5   LPPTALRNVLTALMLAIFLGALDQTIVAVSLPAISAQFSDVGLLAWVISGYMVAMTVAVP 64

Query: 82  VAGSLSDHIGRRPVVLGALALQAVAMGLFLLAQDIGGLIVARVVQGIATGVASGALSAAV 141
           + G L D  GRR ++L  ++L  +A     +AQD+  L++ARV+QGI  G       A +
Sbjct: 65  IYGKLGDLYGRRRMILTGISLFTLASIACAMAQDMPQLVLARVLQGIGAGGMVSVSQAII 124

Query: 142 VE-AAPASRKRLGALITSV---SPLAGLALGALLTGMAVKFSVQPVMLVFGVLAVVFALG 197
            +   P  R R     +S+   + +AG  LG  LT       V  + L  G++A+     
Sbjct: 125 GDFVPPRERGRYQGYFSSMYAAASVAGPVLGGWLTEYLSWRWVFWINLPLGLVAL----- 179

Query: 198 AAVVLWMPETVTRRPGAWASLVPRVSIPARARAEFARGLPVFIAVWALGGLFLSL----- 252
                            WA       +P + R      L   + +  LG L L +     
Sbjct: 180 -----------------WAIRRALADMPVQRREAQVDYLGAMLLILGLGSLLLGITLVGQ 222

Query: 253 ----APSLMLHVFGVDNGVVNGLTVAVLSGVGAIAPTLLGRLAAPRPAIVGMASIAAGLV 308
               A   +L +FG     + GL + +        P L   L   R A++  A      V
Sbjct: 223 GHAWADPAVLALFGC---ALLGLALFIAHERRCPEPLLPLSLFGNRVAVLCWA------V 273

Query: 309 LLLASLATRSLALFFVGTAVAGVGFGGAFSALVQTLAPLAQSHERGELFAAIFVVSYLAF 368
           +  AS  + SL +  +     G+   GA SA +  L PLA     G  F    + S    
Sbjct: 274 IFFASFQSISLTM-LMPLRYQGITGAGADSAALH-LLPLAMGLPMG-AFTGGRMTSRTGR 330

Query: 369 SLPAMLAGFLVKPLGLLA 386
             P +LAG L+ P+ + A
Sbjct: 331 YKPQILAGALLMPVAIFA 348