Pairwise Alignments

Query, 327 a.a., ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) from Variovorax sp. SCN45

Subject, 320 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score =  173 bits (438), Expect = 6e-48
 Identities = 116/322 (36%), Positives = 171/322 (53%), Gaps = 16/322 (4%)

Query: 2   LRRSTFLSAASLVAACGLASPLAAFAQGFPTKPVKLVIAFPAGGPTDITMRQLADNASKI 61
           ++R  F+S  +L AA  L  P  +FAQG   KP++LV+ FP GG TDIT R L +  +KI
Sbjct: 1   MQRRHFIS--TLAAASIL--PGISFAQG---KPIRLVVPFPPGGATDITARVLGEPVAKI 53

Query: 62  LGQPVIIDNKPGAGGTLPAQALQTAQPDGYT--VAQIPLGVFRLGYTTKINWDPLKDITY 119
           L QPV+IDN+ GAGG++    L  A PDG T  +A +           K+ +DP+K    
Sbjct: 54  LQQPVVIDNRAGAGGSIGMAELARATPDGLTFGIATLSTHGVNPAVYQKLPYDPIKGFAA 113

Query: 120 VLNVTGYAFGIVV--PADSPFKTWADFVAYAKANPGKLTYGSTGTLTSPHLTTEIVAQKA 177
           V  +   A G++V  P   P   +A+ V Y KANPGK++Y + G  T  H+  E+     
Sbjct: 114 VTEIV-KAPGVIVINPTKLPVANFAELVKYLKANPGKVSYATPGNGTIGHMWGELFKSTT 172

Query: 178 GIELQHVPYKGSADLMLAVVSGQLMAAADSTGFA-PQVEAGKLRVLNTWGDKRLAKFPDA 236
           G  + H+PY+G+   +  V++G++    D    + P V+AGKL+ L    + RL   PD 
Sbjct: 173 GTSMVHIPYRGAGPAINDVLAGEVPVYFDQVASSLPHVKAGKLKALAVSWNGRLDVLPDV 232

Query: 237 PTLKELGYDVVQNSP--FGIGAPKGTPPEVVKKLHDAFKQAMEEPSYVAALGRYDMLPNY 294
           PT  ELGY    N P  FG+ AP GTP E+V ++  A   A+++ S    L    +  + 
Sbjct: 233 PTYGELGYP-TNNDPSWFGMVAPAGTPAELVLRMQQAVATALKDASVRERLALQGLYASG 291

Query: 295 MSSATYTKFAQDTVVREKVVIE 316
            + A +TK     + + K V E
Sbjct: 292 TTPAQFTKQIASEIDKMKKVAE 313