Pairwise Alignments

Query, 318 a.a., no description from Variovorax sp. SCN45

Subject, 425 a.a., Transcriptional regulator LigR, LysR family from Variovorax sp. SCN45

 Score =  107 bits (266), Expect = 7e-28
 Identities = 79/274 (28%), Positives = 125/274 (45%), Gaps = 3/274 (1%)

Query: 22  RHLQLLVSIADSGGVRRAAEQIGMSQPAATQALADIESLLGTPLFERHVRGMRLTAVGRA 81
           R L ++ S+A    +   A + G++QPA + AL D+ES LG  LF R  RG+  T  G  
Sbjct: 125 RRLAVVASLAQKRNMPAVAREFGITQPAISSALKDLESGLGVALFTRTARGLSPTPAGEI 184

Query: 82  VVPMARNTLSALRASADTVHALQAGAGGVLRVGAIPAAVSGLLCRMLPSFSARHPDLRIE 141
           V    +  LS LR     + A +    G + VGA+P   + +L   + S  ARHP L + 
Sbjct: 185 VAFYFKRVLSELRHIGPDIAASEGSLQGSVTVGALPLGRTQILPLAIASLLARHPQLHVS 244

Query: 142 VVEATGEQLMADVMSGRVDMAL--CRRPAEMPAPCSFEALAPDVPWIVAGRRHPLARKAK 199
            VE+  + L A + SG +D  L   R  A        +AL  D   ++A   HPLAR  +
Sbjct: 245 TVESPYDALAASLRSGDIDFILGALRNNAGEVKDLQQQALFEDRISVIARAGHPLARAER 304

Query: 200 PTLADLRAAHWALPVHGIGVRDIFDALFEAPDAPKPALHSISSTSLPLVLEILRGDRVLS 259
                LR A W L   G   R++ +  F +     P L ++ +  L ++  +L    +L+
Sbjct: 305 IDFRMLREARWTLSRQGSPSRELLERFF-SNARQAPPLPAVETGDLAVLRGLLLESDMLT 363

Query: 260 MVPRSLIAPFVQWGLVARVAFELDSEFEGIGALQ 293
            +    +   ++ G +  + F L+     IG  Q
Sbjct: 364 AISAHQLRYEIRDGSLVVLDFPLEETRREIGLTQ 397



 Score = 54.3 bits (129), Expect = 5e-12
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 12 YARLVAKG-RLRHLQLLVSIADSGGVRRAAEQIGMSQPAATQALADIESLLGTPLFERHV 70
          +A  VA G  LRHL+   ++A +G V  AA+ +     A T+++ D+E+ LG PLF+R  
Sbjct: 13 HADSVALGINLRHLRAFSAVAAAGSVAAAADALYRVASAVTRSVLDLEAALGRPLFDRRA 72

Query: 71 RGMRLTAVGRAVVPMA 86
          RGM L A G  V+  A
Sbjct: 73 RGMALNAYGELVLVRA 88