Pairwise Alignments

Query, 1947 a.a., Excinuclease ABC subunit A, dimeric form from Variovorax sp. SCN45

Subject, 1947 a.a., Excinuclease ABC subunit A, dimeric form from Variovorax sp. SCN45

 Score = 3878 bits (10057), Expect = 0.0
 Identities = 1947/1947 (100%), Positives = 1947/1947 (100%)

Query: 1    MTQGSIRIRGARQHNLQNLDLDIRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFS 60
            MTQGSIRIRGARQHNLQNLDLDIRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFS
Sbjct: 1    MTQGSIRIRGARQHNLQNLDLDIRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFS 60

Query: 61   AYARQFLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAADL 120
            AYARQFLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAADL
Sbjct: 61   AYARQFLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAADL 120

Query: 121  FDRETALPVRHDSPDSIYAQIAERAAAAGDPRLVVTFPVELPASTTAEEVTQWLSASGFT 180
            FDRETALPVRHDSPDSIYAQIAERAAAAGDPRLVVTFPVELPASTTAEEVTQWLSASGFT
Sbjct: 121  FDRETALPVRHDSPDSIYAQIAERAAAAGDPRLVVTFPVELPASTTAEEVTQWLSASGFT 180

Query: 181  RVQSEREVATPTGPRKVLDVVADRFRASSAERSRVVEAIEVALKRGSGRVTVHATGAEEN 240
            RVQSEREVATPTGPRKVLDVVADRFRASSAERSRVVEAIEVALKRGSGRVTVHATGAEEN
Sbjct: 181  RVQSEREVATPTGPRKVLDVVADRFRASSAERSRVVEAIEVALKRGSGRVTVHATGAEEN 240

Query: 241  APTDVWKFSTGLHCPESDIRYADPIPSMFSFNSAVGACDTCRGFGRVIGVDLGLVIPNDK 300
            APTDVWKFSTGLHCPESDIRYADPIPSMFSFNSAVGACDTCRGFGRVIGVDLGLVIPNDK
Sbjct: 241  APTDVWKFSTGLHCPESDIRYADPIPSMFSFNSAVGACDTCRGFGRVIGVDLGLVIPNDK 300

Query: 301  LTLRAGAIKTIQTPAWKEAQDDLMRHAETAGIPRDTPWNKLTDEQKHWVIEGTPNYKEGN 360
            LTLRAGAIKTIQTPAWKEAQDDLMRHAETAGIPRDTPWNKLTDEQKHWVIEGTPNYKEGN
Sbjct: 301  LTLRAGAIKTIQTPAWKEAQDDLMRHAETAGIPRDTPWNKLTDEQKHWVIEGTPNYKEGN 360

Query: 361  WNKQWYGVRRFFAYLESKAYKMHIRVLLSKYRSYTQCPTCSGARLKLDSLIWRIGSKEDA 420
            WNKQWYGVRRFFAYLESKAYKMHIRVLLSKYRSYTQCPTCSGARLKLDSLIWRIGSKEDA
Sbjct: 361  WNKQWYGVRRFFAYLESKAYKMHIRVLLSKYRSYTQCPTCSGARLKLDSLIWRIGSKEDA 420

Query: 421  DAVLPPEKRFMPTGAKWTRAQLEALPGLCLHDLMLLPIERLRKFFDRMGQGMAPSLAGGG 480
            DAVLPPEKRFMPTGAKWTRAQLEALPGLCLHDLMLLPIERLRKFFDRMGQGMAPSLAGGG
Sbjct: 421  DAVLPPEKRFMPTGAKWTRAQLEALPGLCLHDLMLLPIERLRKFFDRMGQGMAPSLAGGG 480

Query: 481  QAALASPAASNEAESPHPNLPPAGEGARQGEAQALKLLFEEITTRLRYLHDVGIGYLTLD 540
            QAALASPAASNEAESPHPNLPPAGEGARQGEAQALKLLFEEITTRLRYLHDVGIGYLTLD
Sbjct: 481  QAALASPAASNEAESPHPNLPPAGEGARQGEAQALKLLFEEITTRLRYLHDVGIGYLTLD 540

Query: 541  RQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMNRITEAMLRLRDAGNTL 600
            RQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMNRITEAMLRLRDAGNTL
Sbjct: 541  RQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMNRITEAMLRLRDAGNTL 600

Query: 601  VVVEHDPAVMLAADRVIDMGPGPGARGGQIVFDGTTDQLRDADTLTGQYLGGRKKIGMGF 660
            VVVEHDPAVMLAADRVIDMGPGPGARGGQIVFDGTTDQLRDADTLTGQYLGGRKKIGMGF
Sbjct: 601  VVVEHDPAVMLAADRVIDMGPGPGARGGQIVFDGTTDQLRDADTLTGQYLGGRKKIGMGF 660

Query: 661  KRLVSENTHRLILEGVREHNLKNITVDFPLARLVCVTGVSGSGKSTLIQDVLAPALMRHF 720
            KRLVSENTHRLILEGVREHNLKNITVDFPLARLVCVTGVSGSGKSTLIQDVLAPALMRHF
Sbjct: 661  KRLVSENTHRLILEGVREHNLKNITVDFPLARLVCVTGVSGSGKSTLIQDVLAPALMRHF 720

Query: 721  GKATETPGAHDRMLGADHLGDVVFVDQSPIGKTARSNPASYVGAWDAIREIFATAALSRQ 780
            GKATETPGAHDRMLGADHLGDVVFVDQSPIGKTARSNPASYVGAWDAIREIFATAALSRQ
Sbjct: 721  GKATETPGAHDRMLGADHLGDVVFVDQSPIGKTARSNPASYVGAWDAIREIFATAALSRQ 780

Query: 781  RGYTASKFSFNSGDGRCPTCGGSGFEHVEMQFLSDVYLRCPDCDGKRYRPEILEVRVERK 840
            RGYTASKFSFNSGDGRCPTCGGSGFEHVEMQFLSDVYLRCPDCDGKRYRPEILEVRVERK
Sbjct: 781  RGYTASKFSFNSGDGRCPTCGGSGFEHVEMQFLSDVYLRCPDCDGKRYRPEILEVRVERK 840

Query: 841  GKSYNVADVLDLTVAEAAAVFEADRDVLRVLQPISDVGLDYVKLGQPVPTLSGGEAQRLK 900
            GKSYNVADVLDLTVAEAAAVFEADRDVLRVLQPISDVGLDYVKLGQPVPTLSGGEAQRLK
Sbjct: 841  GKSYNVADVLDLTVAEAAAVFEADRDVLRVLQPISDVGLDYVKLGQPVPTLSGGEAQRLK 900

Query: 901  LAGFLAEAAKGATASKQSVARKGTLFLFDEPTTGLHFDDIARLMRALRKLLEAGHSLIVI 960
            LAGFLAEAAKGATASKQSVARKGTLFLFDEPTTGLHFDDIARLMRALRKLLEAGHSLIVI
Sbjct: 901  LAGFLAEAAKGATASKQSVARKGTLFLFDEPTTGLHFDDIARLMRALRKLLEAGHSLIVI 960

Query: 961  EHNLDVIRASDWLIDLGPEGGEGGGQVVAEGTPEQLRENRASLTGAALADYELAIGPDAY 1020
            EHNLDVIRASDWLIDLGPEGGEGGGQVVAEGTPEQLRENRASLTGAALADYELAIGPDAY
Sbjct: 961  EHNLDVIRASDWLIDLGPEGGEGGGQVVAEGTPEQLRENRASLTGAALADYELAIGPDAY 1020

Query: 1021 KVAERAARRYIANAKKAPGSDAVQIVNAREHNLKNLSVDIPRGKFSVVTGVSGSGKSTLA 1080
            KVAERAARRYIANAKKAPGSDAVQIVNAREHNLKNLSVDIPRGKFSVVTGVSGSGKSTLA
Sbjct: 1021 KVAERAARRYIANAKKAPGSDAVQIVNAREHNLKNLSVDIPRGKFSVVTGVSGSGKSTLA 1080

Query: 1081 FDILFNEGQRRYLESLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTT 1140
            FDILFNEGQRRYLESLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTT
Sbjct: 1081 FDILFNEGQRRYLESLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTT 1140

Query: 1141 TEVWHFLRLLYVKLGIQHCIHDGAAVQPQTPDSIAAQLMRNFKGQHIGLLAPLVSNRKGV 1200
            TEVWHFLRLLYVKLGIQHCIHDGAAVQPQTPDSIAAQLMRNFKGQHIGLLAPLVSNRKGV
Sbjct: 1141 TEVWHFLRLLYVKLGIQHCIHDGAAVQPQTPDSIAAQLMRNFKGQHIGLLAPLVSNRKGV 1200

Query: 1201 YTELADWARPRGFTHLRVDGDFLPTTGFPRIDRFKEHSIELPVASLDVLPSKETELREAL 1260
            YTELADWARPRGFTHLRVDGDFLPTTGFPRIDRFKEHSIELPVASLDVLPSKETELREAL
Sbjct: 1201 YTELADWARPRGFTHLRVDGDFLPTTGFPRIDRFKEHSIELPVASLDVLPSKETELREAL 1260

Query: 1261 TKALEHGKGVVHVLSELDGLRAAMMAGVSAAGIGRVHVFSTLRACPVCSTSYAELDPRLF 1320
            TKALEHGKGVVHVLSELDGLRAAMMAGVSAAGIGRVHVFSTLRACPVCSTSYAELDPRLF
Sbjct: 1261 TKALEHGKGVVHVLSELDGLRAAMMAGVSAAGIGRVHVFSTLRACPVCSTSYAELDPRLF 1320

Query: 1321 SYNSKHGWCPDCVGTGVKLSKDQRKVFDDSVRDDDNKGREQTFAEPEVEDLADVACPTCE 1380
            SYNSKHGWCPDCVGTGVKLSKDQRKVFDDSVRDDDNKGREQTFAEPEVEDLADVACPTCE
Sbjct: 1321 SYNSKHGWCPDCVGTGVKLSKDQRKVFDDSVRDDDNKGREQTFAEPEVEDLADVACPTCE 1380

Query: 1381 GTRLNATARAVSFGASLANGSGGIGITELARMSVTEVRQWFEGLALTGREAEIARDLVPE 1440
            GTRLNATARAVSFGASLANGSGGIGITELARMSVTEVRQWFEGLALTGREAEIARDLVPE
Sbjct: 1381 GTRLNATARAVSFGASLANGSGGIGITELARMSVTEVRQWFEGLALTGREAEIARDLVPE 1440

Query: 1441 IKSRLEFLEEVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHAR 1500
            IKSRLEFLEEVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHAR
Sbjct: 1441 IKSRLEFLEEVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHAR 1500

Query: 1501 DNQILLNALHKLGEKGNTLVVVEHDEDTIRRADHIIDIGPSAGKRGGRLVAEGTVADIQN 1560
            DNQILLNALHKLGEKGNTLVVVEHDEDTIRRADHIIDIGPSAGKRGGRLVAEGTVADIQN
Sbjct: 1501 DNQILLNALHKLGEKGNTLVVVEHDEDTIRRADHIIDIGPSAGKRGGRLVAEGTVADIQN 1560

Query: 1561 AGDSQTGRYLRDAIRHPLQARRSIPSPDPQAEDNGEWLTVHGADLHNLQDLTATLPLHRL 1620
            AGDSQTGRYLRDAIRHPLQARRSIPSPDPQAEDNGEWLTVHGADLHNLQDLTATLPLHRL
Sbjct: 1561 AGDSQTGRYLRDAIRHPLQARRSIPSPDPQAEDNGEWLTVHGADLHNLQDLTATLPLHRL 1620

Query: 1621 VVVTGVSGSGKSTLARDVLLASVQGIVVQRMTKAGRDADAAGKRPAWAGCRKVDGYETID 1680
            VVVTGVSGSGKSTLARDVLLASVQGIVVQRMTKAGRDADAAGKRPAWAGCRKVDGYETID
Sbjct: 1621 VVVTGVSGSGKSTLARDVLLASVQGIVVQRMTKAGRDADAAGKRPAWAGCRKVDGYETID 1680

Query: 1681 RVLEVDQTPIGKTPRSCPATYIGFWDTIRKLFADTLEAKARGYGPARFSFNTGEGRCPGC 1740
            RVLEVDQTPIGKTPRSCPATYIGFWDTIRKLFADTLEAKARGYGPARFSFNTGEGRCPGC
Sbjct: 1681 RVLEVDQTPIGKTPRSCPATYIGFWDTIRKLFADTLEAKARGYGPARFSFNTGEGRCPGC 1740

Query: 1741 EGAGVRTIEMSFLPDVKVPCEVCHGARFNPETLAVSWRGKSIGDVLKMEVDEAVEFFASM 1800
            EGAGVRTIEMSFLPDVKVPCEVCHGARFNPETLAVSWRGKSIGDVLKMEVDEAVEFFASM
Sbjct: 1741 EGAGVRTIEMSFLPDVKVPCEVCHGARFNPETLAVSWRGKSIGDVLKMEVDEAVEFFASM 1800

Query: 1801 PNIAHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDITRRGQKAPHTLY 1860
            PNIAHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDITRRGQKAPHTLY
Sbjct: 1801 PNIAHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDITRRGQKAPHTLY 1860

Query: 1861 VLDEPTVGLHMADVEKLIHVLHRLVNGGHSVVVIEHDLDLIAEADWIIDLGPEGGNAGGR 1920
            VLDEPTVGLHMADVEKLIHVLHRLVNGGHSVVVIEHDLDLIAEADWIIDLGPEGGNAGGR
Sbjct: 1861 VLDEPTVGLHMADVEKLIHVLHRLVNGGHSVVVIEHDLDLIAEADWIIDLGPEGGNAGGR 1920

Query: 1921 IVAAAPPEEVVRLGTHTGVALAPVLAR 1947
            IVAAAPPEEVVRLGTHTGVALAPVLAR
Sbjct: 1921 IVAAAPPEEVVRLGTHTGVALAPVLAR 1947