Pairwise Alignments

Query, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 394 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 94/371 (25%), Positives = 159/371 (42%), Gaps = 29/371 (7%)

Query: 6   MLCAAALLAFSAVGASA---------QLLIGQTAGMTGSVAASVNETIGGAQLVIDAVNA 56
           ML AAA++  +AV   A          + IG     TG  A   +      +L +D +N 
Sbjct: 10  MLRAAAIMLATAVAGPALTSPAFAADPIKIGSVVSATGPSAFLGDPEAKTLKLYVDELNK 69

Query: 57  QGGLYGEKIEVLRMDDGFDVKRASDNARTLIEDKKVLALFMSRGTPHSQAIIPWLDKYDV 116
           +GGL G  +E++  DDG D  +A   A  L+ED KV+A+     T  + A+IP  ++  +
Sbjct: 70  KGGLLGRPVELVLYDDGGDANKARTFATRLVEDDKVVAMVGGTSTGATMAMIPVFEEAGI 129

Query: 117 ALVGPSTGAMVLHKPLQKHVFNVRATYQREAEKAVQHLLTIGLTRIAVVYVTDSFGQDAL 176
             V  + G  ++ +P++  +F    T +   +K  + +   G+T+I ++  TD FG+   
Sbjct: 130 PFVSLAGGIEII-EPVRAFIFKTPHTDKTACQKIFEDMKARGITKIGMISGTDGFGKSMR 188

Query: 177 EGAMTGFTKGKAKPTATIPADRDKPDYKVIVPAIKE-ANAQAVVWIGSGVAVVDGIKALR 235
              +    +      A         D    +  IK  A  +AV+  G G       +   
Sbjct: 189 NQCLKVIGQYGISVVADENYGATDSDMTPQLNKIKNTAGVEAVLNPGFGQGPAIVTRNYA 248

Query: 236 AAGSAAQVVTLSNNASSGFIKQLGDASKGV--------IVTQVFPNERSLGQPMVKEALT 287
             G    +      AS  FI+  G A++GV        I  ++  N+    +P+V E  T
Sbjct: 249 QLGIKLPLYQSHGVASKSFIELAGPAAEGVRLPAPAILIGDKLAANDPQ--KPVVAEYKT 306

Query: 288 -LAQAKGQ--SELSPAALEGFASAKVLVEALRRAGPKPTRAKVIAALESIKGFDLGGGLD 344
              +A GQ  S       +G       +E+ + A PK    K+  ALE+ KG+    G+ 
Sbjct: 307 SYEKATGQPVSTFGGYGYDGIQLVARAIESAKSADPK----KIRDALEATKGYVGVTGI- 361

Query: 345 VSYSPQDHSGI 355
            +++P DH G+
Sbjct: 362 YTFAPADHLGL 372