Pairwise Alignments

Query, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 378 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 84.3 bits (207), Expect = 5e-21
 Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 4/240 (1%)

Query: 2   KKTFTSCAVAFLLATGAPAVSAQILIGQSADLSGPVAASVKETIMGSQLVIDAVNAQGGI 61
           KK F + AVA  L      V A + IG +  ++G  AA  ++ + G+Q   D +N  GGI
Sbjct: 7   KKGFLALAVAAALGVST-FVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADVINKAGGI 65

Query: 62  NGEQIEVIRMDDGLDAKRSLENTRVLIEDKKVVALLLNRGTPNTLAVIPLLDKYGVALVG 121
           NGE+I ++  DD  + K+++     L +  KV+ ++ +  + NT+    + D+ G+  + 
Sbjct: 66  NGEKIVLVAGDDACEPKQAVAVANRLADQDKVIGVVGHFCSSNTIPASEVYDEAGIIAIT 125

Query: 122 P-STGAMALHKPLQKNIFNVRSTYQREAEKAVQHL-QTTGIQRIAVVQADDSFGKDAMEG 179
           P ST      + L   +F +     ++   A  ++      +++AV+   D++GK   + 
Sbjct: 126 PGSTNPQVTERGLGA-MFRMCGRDDQQGIVAGDYIVDVLKGKKVAVINDKDTYGKGLADA 184

Query: 180 ANKGFEKAGLKPVVVALADRNKPDYGAIVPQLTKSNAQAVLWIGSGTAVTDGIKALRAAG 239
                 K G+KPV+     R + D+ A+V ++  + A  V + G        ++ +R AG
Sbjct: 185 TAAQLTKRGVKPVLEEGLTRGEKDFSALVTKIRSTGADVVYFGGLHPEAGPLVRQIREAG 244