Pairwise Alignments

Query, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

 Score =  500 bits (1288), Expect = e-146
 Identities = 256/371 (69%), Positives = 305/371 (82%), Gaps = 2/371 (0%)

Query: 1   MKKTFTSCAVAFLLATGAPAVSAQILIGQSADLSGPVAASVKETIMGSQLVIDAVNAQGG 60
           M KT   CA A LLA  A   SAQ+LIGQ+A ++G VAASV ETI G+QLVIDAVNAQGG
Sbjct: 1   MTKTRMLCAAA-LLAFSAVGASAQLLIGQTAGMTGSVAASVNETIGGAQLVIDAVNAQGG 59

Query: 61  INGEQIEVIRMDDGLDAKRSLENTRVLIEDKKVVALLLNRGTPNTLAVIPLLDKYGVALV 120
           + GE+IEV+RMDDG D KR+ +N R LIEDKKV+AL ++RGTP++ A+IP LDKY VALV
Sbjct: 60  LYGEKIEVLRMDDGFDVKRASDNARTLIEDKKVLALFMSRGTPHSQAIIPWLDKYDVALV 119

Query: 121 GPSTGAMALHKPLQKNIFNVRSTYQREAEKAVQHLQTTGIQRIAVVQADDSFGKDAMEGA 180
           GPSTGAM LHKPLQK++FNVR+TYQREAEKAVQHL T G+ RIAVV   DSFG+DA+EGA
Sbjct: 120 GPSTGAMVLHKPLQKHVFNVRATYQREAEKAVQHLLTIGLTRIAVVYVTDSFGQDALEGA 179

Query: 181 NKGFEKAGLKPVVVALADRNKPDYGAIVPQLTKSNAQAVLWIGSGTAVTDGIKALRAAGS 240
             GF K   KP     ADR+KPDY  IVP + ++NAQAV+WIGSG AV DGIKALRAAGS
Sbjct: 180 MTGFTKGKAKPTATIPADRDKPDYKVIVPAIKEANAQAVVWIGSGVAVVDGIKALRAAGS 239

Query: 241 AAQIITLSNNAASGFIKELGSASAGVIITQVLPYERAMGHPLIKEAATLAKAKGQNELSP 300
           AAQ++TLSNNA+SGFIK+LG AS GVI+TQV P ER++G P++KEA TLA+AKGQ+ELSP
Sbjct: 240 AAQVVTLSNNASSGFIKQLGDASKGVIVTQVFPNERSLGQPMVKEALTLAQAKGQSELSP 299

Query: 301 ALLEGFVATKVMVEALRRTGPKPTRAKLIATLNNFQ-YDLGPGLDISYSPTDHTGIEYVD 359
           A LEGF + KV+VEALRR GPKPTRAK+IA L + + +DLG GLD+SYSP DH+GI++ D
Sbjct: 300 AALEGFASAKVLVEALRRAGPKPTRAKVIAALESIKGFDLGGGLDVSYSPQDHSGIDFAD 359

Query: 360 LSIVSDGRFKR 370
           LSI+SDGRFKR
Sbjct: 360 LSIISDGRFKR 370