Pairwise Alignments

Query, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 90.1 bits (222), Expect = 9e-23
 Identities = 62/240 (25%), Positives = 119/240 (49%), Gaps = 4/240 (1%)

Query: 2   KKTFTSCAVAFLLATGAPAVSAQILIGQSADLSGPVAASVKETIMGSQLVIDAVNAQGGI 61
           KK F + AVA  L   +  V A + IG +  ++G  AA  ++ + G+Q   D +NA GG+
Sbjct: 7   KKGFLALAVATALGVSS-YVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGV 65

Query: 62  NGEQIEVIRMDDGLDAKRSLENTRVLIEDKKVVALLLNRGTPNTLAVIPLLDKYGVALVG 121
           NGE+I +++ DD  + K+++     L++  KV+ ++ +  + NT+    + D+ GV  + 
Sbjct: 66  NGEKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAIT 125

Query: 122 P-STGAMALHKPLQKNIFNVRSTYQREAEKAVQHL-QTTGIQRIAVVQADDSFGKDAMEG 179
           P ST      + L   +F +     ++   A  ++      +++AV+   D++G+   + 
Sbjct: 126 PGSTNPQVTERGLSA-MFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADA 184

Query: 180 ANKGFEKAGLKPVVVALADRNKPDYGAIVPQLTKSNAQAVLWIGSGTAVTDGIKALRAAG 239
                EK G+KPV+     R + D+ A+V ++  + A  V + G        ++ LR  G
Sbjct: 185 TKAQLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQG 244