Pairwise Alignments

Query, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 371 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Erwinia tracheiphila SCR3

 Score = 74.3 bits (181), Expect = 5e-18
 Identities = 71/306 (23%), Positives = 123/306 (40%), Gaps = 15/306 (4%)

Query: 20  AVSAQILIGQSADLSGPVAASVKETIMGSQLVIDAVNAQGGINGEQIEVIRMDDGLDAKR 79
           A +  I +     +SGPVA        G++  I  +NA+GGING+++  +  DD  D K+
Sbjct: 22  AAAKDIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAKGGINGDKLVGVEYDDACDPKQ 81

Query: 80  SLENTRVLIED--KKVVALLLNRGTPNTLAVIPLLDKY---GVALVGPSTGAMALHKPLQ 134
           ++     +I    + V+  L +  T       P  D Y   GV ++ P+     L     
Sbjct: 82  AVAVANKVINAGIRYVIGHLCSSSTQ------PASDIYEDEGVLMITPAATNTNLTTRGY 135

Query: 135 KNIFNVRSTYQREAEKAVQH-LQTTGIQRIAVVQADDSFGKDAMEGANKGFEKAGLKPVV 193
           K I         +A  A ++ L      RIAV+     +G+          +K+G   V+
Sbjct: 136 KLIMRTTGLDSDQAPTAAKYILSEIKPHRIAVIHDKQQYGEGLARSVQDSLKKSGGNVVM 195

Query: 194 VALADRNKPDYGAIVPQLTKSNAQAVLWIGSGTAVTDGIKALRAAGSAAQIITLSNNAAS 253
                    D+  +V +L K N   V + G    +   ++  RAAG   Q +       S
Sbjct: 196 FEGITAGDKDFSTLVARLKKENIDFVYFGGYYPEMGQILRQSRAAGLKTQFMGPEGVGNS 255

Query: 254 GFIKELGSASAGVIITQVLPYERAMGHPLIKEAATLAKAKGQNELSPALLEGFVATKVMV 313
                 G+AS G+++T    Y++    P  K      KA+ Q+   P +   + A + + 
Sbjct: 256 SLSNIAGAASEGMLVTLPKRYDQV---PANKSIVDALKARKQDSTGPFVWTTYAALQALT 312

Query: 314 EALRRT 319
             + R+
Sbjct: 313 TGMERS 318