Pairwise Alignments

Query, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 370 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 8/325 (2%)

Query: 20  AVSAQILIGQSADLSGPVAASVKETIMGSQLVIDAVNAQGGINGEQIEVIRMDDGLDAKR 79
           A +A I +     +SGPVA        G++  I  +NA+GG+NG ++  +  DD  D K+
Sbjct: 22  ANAADIKVAIVGAMSGPVAQYGDMEFTGARQAIADINAKGGVNGNKLVGVEYDDACDPKQ 81

Query: 80  SLENTRVLIEDKKVVALLLNRGTPNTLAVIPLLDKYGVALVGPSTGAMALHKPLQKNIFN 139
           ++     +I +  +  ++ +  + +T     + +  GV ++ P+  A  L     K +  
Sbjct: 82  AVAVANKVINEG-IHYVIGHLCSSSTQPASDIYEDEGVIMITPAATAPDLTTRGYKLVMR 140

Query: 140 VRSTYQREAEKAVQH-LQTTGIQRIAVVQADDSFGKDAMEGANKGFEKAGLKPVVVALAD 198
                  +   A ++ L+    QRIAVV     +G+          +KA    V+     
Sbjct: 141 TTGLDSDQGPTAAKYILEHVKPQRIAVVHDKQQYGEGLARAVQDSLKKAKANVVLFEGVT 200

Query: 199 RNKPDYGAIVPQLTKSNAQAVLWIGSGTAVTDGIKALRAAGSAAQIITLSNNAASGFIKE 258
               D+  +V +L K N   V + G    +   ++  RAAG   + +       S     
Sbjct: 201 AGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQARAAGITTKFMGPEGVGNSSLSNI 260

Query: 259 LGSASAGVIITQVLPYERAMGHPLIKEAATLAKAKGQNELSPALLEGFVATKVMVEALRR 318
            G+AS G+++T    Y++   +  I +A    KAK  +   P +   + A + +  A++R
Sbjct: 261 AGAASEGMLVTLPKRYDQVPTNQPIVDA---LKAKKLDSTGPFVWTTYAALQSLTTAMQR 317

Query: 319 TGPKPTRAKLIATLNNFQYD--LGP 341
           TG     AKL A L     D  +GP
Sbjct: 318 TG-STEPAKLAADLKAKSVDTVMGP 341