Pairwise Alignments

Query, 564 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 500 a.a., osmosensory proline/betaine/H+ permease from Pseudomonas putida KT2440

 Score =  215 bits (548), Expect = 3e-60
 Identities = 125/331 (37%), Positives = 185/331 (55%), Gaps = 16/331 (4%)

Query: 20  AEEKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFSGLDAGAAFIFALLAFAAGFLVRP 79
           A+ KK I A++LG   EW+DF +YG +A  + K FF   D     I AL  F+  FL+RP
Sbjct: 22  AKMKKAITAAALGNAMEWFDFGVYGFVAYALGKVFFPNADPSVQMIAALATFSVPFLIRP 81

Query: 80  FGAIVFGRLGDMIGRKYTFLVTILIMGLSTFIVGLLPSYATIGVAAPVILIALRMLQGLA 139
            G + FG LGD  GR+     TI+IM LSTF +GL+PSYA+IG+ AP++L+  +M QG +
Sbjct: 82  LGGLFFGALGDRFGRQKILAATIVIMSLSTFAIGLIPSYASIGIWAPILLLLAKMAQGFS 141

Query: 140 LGGEYGGAATYVAEHAPHGKRGAYTSWIQTTATLGLFLSLLVILGVREGMGEAAFNDWGW 199
           +GGEY GA+ +VAE+AP  KRG   SW+   +  G  L   V++ +   +GE  F DWGW
Sbjct: 142 VGGEYTGASIFVAEYAPDRKRGFLGSWLDFGSIAGFVLGAGVVVLISTVLGEEKFLDWGW 201

Query: 200 RIPFLVSILLLGISVWIRLTLSESPAFQKM-------KAEGKTS--KAPLSESFGQ-WKN 249
           R+PF +++ L  I +++R  L E+PAFQ+          EG  S  K    E   Q W++
Sbjct: 202 RLPFFLALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLASGPKVSFKEVATQHWRS 261

Query: 250 LKIVILALVGLTAGQAVVWYSGQFYALFFLTAQLKVDATTANLMIAAALLLGTPFF-VIF 308
           L    +  +G+     V +Y    Y   +L+  L   +    ++I  A+++G  F   I 
Sbjct: 262 L----VTCIGVVIATNVTYYMLLTYMPSYLSHNLHY-SEDHGVLIIIAIMVGMLFVQPII 316

Query: 309 GTLSDKIGRKPIIMAGCLLAVVTYFPVFKML 339
           G LSDK GR+P I+ G +  +    P F ++
Sbjct: 317 GLLSDKFGRRPFIIVGSVGLLALAIPAFMLI 347



 Score = 49.7 bits (117), Expect = 3e-10
 Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 2/86 (2%)

Query: 470 LFWLVLLVTMVYGPIAAMLVELFPTRIRYTSMSLPYHIGNGWFGGLLPTTAFAIVASTGN 529
           L  + +L+    G +A+ L  +FPT IRY++++  ++I +    GL PT A  +V +T +
Sbjct: 359 LLIIAVLLNFFIGVMASTLPAMFPTHIRYSALASAFNI-SVLIAGLTPTLAAWLVETTND 417

Query: 530 MYNGLWYPIIIAGITLVIGTLFIRET 555
           +Y   +Y ++IA + LV G L ++ET
Sbjct: 418 LYMPAYYLMVIAAVGLVTG-LTMKET 442