Pairwise Alignments

Query, 306 a.a., Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) from Variovorax sp. SCN45

Subject, 299 a.a., Hydroxymethylglutaryl-CoA lyase from Pseudomonas putida KT2440

 Score =  328 bits (842), Expect = 7e-95
 Identities = 167/299 (55%), Positives = 215/299 (71%), Gaps = 4/299 (1%)

Query: 1   MKLPTQVRIVDVGPRDGLQNEKQPVSAEVKIGLVHRLQDAGLKEIEVTSFVSPKWVPQMA 60
           M LP  VR+V+VGPRDGLQNE QP+S   K+ LV+ L +AGL  IEV SFVSPKWVPQMA
Sbjct: 1   MSLPKHVRLVEVGPRDGLQNEAQPISVADKVRLVNDLTEAGLAYIEVGSFVSPKWVPQMA 60

Query: 61  DNAEVMHGIRRKPGVRYSVLTPNMKGFEAAIAAPREEWPDEIVVFGAASEAFSQKNINCS 120
            +AEV  GI+++PGV Y+ L PN++GFE A+AA  +E    + VF AASEAFSQ+NINCS
Sbjct: 61  GSAEVFAGIQQRPGVTYAALAPNLRGFEDALAAGVKE----VAVFAAASEAFSQRNINCS 116

Query: 121 IAESIERFAPVVAAALEKGIAVRGAMSCTVGCPYEGEIAPAKVGYLAQLMKGIGVQRVDV 180
           I+ES++RF P++ AA   G+ VRG +SC +GCPYEG+++  +V  +A+ +  +G   V +
Sbjct: 117 ISESLKRFEPIMDAARSHGMRVRGYVSCVLGCPYEGKVSAEQVAPVARALHDMGCYEVSL 176

Query: 181 ADTIGVGTPRKVQAAMDATLAHFGVDAISGHFHDTYGQALVNTLAALELGVWNFQSSSAG 240
            DTIG GT    +   +   A    + ++GHFHDTYGQAL N  A+L  G+  F SS AG
Sbjct: 177 GDTIGTGTAGDTRRLFEVVSAQVPREQLAGHFHDTYGQALANVYASLLEGISVFDSSVAG 236

Query: 241 LGGCPYAKGATGNVATEDVVYMLHGMGIETGIDLDRLIDAGVYISEALGREPNSRASKA 299
           LGGCPYAKGATGN+A+EDVVY+L G+GIETGIDL  LI AG  IS  LGR+  SR ++A
Sbjct: 237 LGGCPYAKGATGNIASEDVVYLLQGLGIETGIDLGLLIAAGQRISGVLGRDNGSRVARA 295