Pairwise Alignments

Query, 306 a.a., Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) from Variovorax sp. SCN45

Subject, 297 a.a., hydroxymethylglutaryl-CoA lyase from Magnetospirillum magneticum AMB-1

 Score =  363 bits (933), Expect = e-105
 Identities = 180/299 (60%), Positives = 225/299 (75%), Gaps = 4/299 (1%)

Query: 1   MKLPTQVRIVDVGPRDGLQNEKQPVSAEVKIGLVHRLQDAGLKEIEVTSFVSPKWVPQMA 60
           M+ P++V+IV+VGPRDGLQNE +PV+ E+++GL++RL   GL  IE  SFVSPKWVPQMA
Sbjct: 1   MRHPSRVKIVEVGPRDGLQNEARPVAVEIRVGLINRLTGTGLTAIESGSFVSPKWVPQMA 60

Query: 61  DNAEVMHGIRRKPGVRYSVLTPNMKGFEAAIAAPREEWPDEIVVFGAASEAFSQKNINCS 120
             AEVM  I R+PGV Y VLTPN++G EAA+AA  EE    + VF AASE FSQKNINCS
Sbjct: 61  ATAEVMAAITRRPGVAYPVLTPNLQGLEAALAAKVEE----VAVFAAASETFSQKNINCS 116

Query: 121 IAESIERFAPVVAAALEKGIAVRGAMSCTVGCPYEGEIAPAKVGYLAQLMKGIGVQRVDV 180
           IAES+ERFAP+ A A  +G+ VRG +SC +GCPYEG + P+ V  +A+ +  +G   + +
Sbjct: 117 IAESLERFAPLAARAKAEGLRVRGYVSCVLGCPYEGAVEPSAVAGVAEKLVAMGCYEISL 176

Query: 181 ADTIGVGTPRKVQAAMDATLAHFGVDAISGHFHDTYGQALVNTLAALELGVWNFQSSSAG 240
            DT+GVGTP K QA +DA  A   V+ ++ HFHDTYGQAL N LA +E GV    SS AG
Sbjct: 177 GDTVGVGTPAKAQAMIDAVTARLPVEMLAAHFHDTYGQALANLLAVMERGVAVMDSSVAG 236

Query: 241 LGGCPYAKGATGNVATEDVVYMLHGMGIETGIDLDRLIDAGVYISEALGREPNSRASKA 299
           LGGCPYAKGA GNVA+ED+VYML+GMGI TGIDLDRLI+AG +I EALGR   S+ ++A
Sbjct: 237 LGGCPYAKGAAGNVASEDLVYMLNGMGIHTGIDLDRLIEAGTFICEALGRATGSKVARA 295