Pairwise Alignments

Query, 304 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 299 a.a., CnmA from Pseudomonas putida KT2440

 Score =  180 bits (456), Expect = 4e-50
 Identities = 106/287 (36%), Positives = 159/287 (55%), Gaps = 4/287 (1%)

Query: 10  LLLVFDRMLAEKRVSAVAESLGLSQPAISNALARLRKLLGDELFLRTARGMEPTPFALQL 69
           LL +FD +   + V+  AE LG SQP IS  LARLR+ L D LF+RT  GM PTP A QL
Sbjct: 12  LLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTPRADQL 71

Query: 70  AEPVAYAMGALHTALNQQVVFDPATSTRSFTLAMTDIGEIYFTPKLMEALSVAAPGVTVS 129
             P    + +L      +  F  AT+ R F L ++D   I   P ++  L   APG+ + 
Sbjct: 72  IGPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAPGIRLE 131

Query: 130 TLRNNTATNLRDELEAGHVDIAIGLLPQLKAGVFQRRLFLQQYVCLFSQAHPLAKKRSVS 189
             R +   N    LE+G  D+AIG +P L  G++Q+ LF Q +VCL +  HP      +S
Sbjct: 132 AARID--GNTESALESGEADLAIGFVPWLGGGMYQQVLFEQDWVCLSNPQHPRLGD-GMS 188

Query: 190 LKDFSAADHVQVLAAGTGHGKADDVMAAQGIQRRIKLRVPHFVAIGHILHSSHMIATVPE 249
           L+ + A  HVQ+ + GTG    +  +A  GI+RRI L +P F+ +G I+ ++ ++ T+P 
Sbjct: 189 LERYRAEGHVQI-SFGTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDLLGTLPR 247

Query: 250 RLAQSIAEPFGLVWRPHPVALPQIAINLFWHAKAHRDPGNQWMRGVL 296
            + Q++A+  GL     P  +    +   WHA+ H+D GN+W+R V+
Sbjct: 248 HIGQTLADMHGLQVHDCPFEVEGFTVKQHWHARYHQDNGNRWLREVV 294