Pairwise Alignments

Query, 249 a.a., Transcriptional regulator, IclR family from Variovorax sp. SCN45

Subject, 291 a.a., transcription regulatory protein (pca regulon) from Pseudomonas putida KT2440

 Score = 60.8 bits (146), Expect = 3e-14
 Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 2/180 (1%)

Query: 8   RVIEIVELFAREKQPLALSEMARLLDMPVSSCLGLIRTLEEQGYMYETGRRQGYYPTGRL 67
           R + +++ F   K+ L +++++   ++P ++    + TL + GY    GR     P  ++
Sbjct: 50  RGLAVIQAFQERKRHLTIAQISHRTEIPRAAVRRCLHTLIKLGYATTDGRTYSLLP--KV 107

Query: 68  LAMAQVIAAHDPVLDRVKATLEELRDAARETVVFGKFRDAGQVVYLEVLSAPQAIRYSAE 127
           L +     +  P+    +  L+ + D   E            +      +  + I     
Sbjct: 108 LTLGHAYLSSTPLAISAQPYLDRISDQLHEAANMATLEGDDILYIARSATVERLISVDLS 167

Query: 128 SGETRPAYANSLGRALLSTLEPEARRQLLQGMALAPLTEATLTTAEAIEAELQRGAARGW 187
            G   PAY  S+GR LL+ ++  + R+ L+   L   T  TL   E++ A +Q+  A+GW
Sbjct: 168 VGGRLPAYCTSMGRILLAAMDDTSLREYLERADLKARTSRTLNDPESLFACIQQVRAQGW 227