Pairwise Alignments

Query, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 10/330 (3%)

Query: 14  TPMAFVRAIVQGYERYGVDPAEALKAAQITPRELARPGARVTAAQFEALSEHAMQELDDE 73
           T  ++   IV+  E  G+D     K   +    L+ P AR        L + A++   + 
Sbjct: 6   TSASWAMGIVKALEMDGLDCRALFKQLGLDYAALSDPDARFPQDSMTRLWQRAVELSGNP 65

Query: 74  ALGW-FSRRLPWGSYGMLCRASLTSPDLGVAIKRWCRHHRLLTDDIGLALEVAGGVATLR 132
           A+G    + +   S+ +   A ++S  L     R  R+ R++ +   L+  +      L 
Sbjct: 66  AIGLNMGKVVRPASFHVAGYALMSSNTLAEGFMRLVRYQRIIAESADLSFRLVPEGYALI 125

Query: 133 IT---ENRPLDDAFREFCLVTSLRFMHGYMC-WAIDSRISLRSASFPFAAPPHSDAYAPM 188
           +T   ++ P      E  L ++L      +C W     +  R        P     Y   
Sbjct: 126 LTVHGDHLPPTRQSAEASLASALA-----LCGWLTGRTLQPRKVVLQGEQPADLAPYKQA 180

Query: 189 FTPEVRFDAPQAGISFDERYLALPLQRDERALRTMLKRALPLTILQYRRDRLLGQRVREL 248
           F   + F+AP   + F+   +  PL     A+  +  R     + ++   R+  +  + L
Sbjct: 181 FHAPLEFNAPYDALIFERADMDAPLPTANEAMALLHDRFAGEYLARFSESRVTHKARQVL 240

Query: 249 LRSRASEATTAEALAGLLNVSGRTLHRQLHEEGTSLQTLKNEVRHELAVELLRRTTRPIK 308
            R         E +A  L++S RTL R+L EEGTS QTL ++ R ELA + L + +  + 
Sbjct: 241 CRLLPQGEPKREVVAQALHLSQRTLQRRLQEEGTSFQTLLDDTRRELAEQYLAQPSMTLL 300

Query: 309 QVALAVGFRNEKSFSRAFLQWTGHAPRDFR 338
           ++A  +GF +  +F RAF +W    P ++R
Sbjct: 301 EIAYLLGFADPSNFFRAFRRWFDATPGEYR 330