Pairwise Alignments

Query, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 332 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  159 bits (401), Expect = 1e-43
 Identities = 106/322 (32%), Positives = 158/322 (49%), Gaps = 4/322 (1%)

Query: 18  FVRAIVQGYERYGVDPAEALKAAQITPRELARPGARVTAAQFEALSEHAMQELDDEALGW 77
           + RA + G  R G D +  L+   ITP  L  P AR+   QF  L +     LDDE LG+
Sbjct: 10  YARAALGGARRAGYDYSGLLQQVGITPELLTEPRARIAPEQFTRLLQMLWLALDDEYLGF 69

Query: 78  FSRRLPWGSYGMLCRASLTSPDLGVAIKRWCRHHRLLTDDIGLALEVAGGVATLRITENR 137
                  G++ M+C A +    L  A++R    + L        L   G +A L + +++
Sbjct: 70  ADGPSKRGTFAMMCHALIHCRTLEKALERGLLFYSLFPQGPRWQLTREGEMARLSLDDSQ 129

Query: 138 PLD-DAFREFCLVTSLRFMHGYMCWAIDSRISLRSASFPFAAPPHSDAYAPMFTPEVRFD 196
             D + F   CL+      H    W I  RI L  A+F +  P H+  Y  +F     F 
Sbjct: 130 LWDPEHFLSECLLV---IWHRLGSWLIGQRIRLHQATFSYPQPAHASEYDLLFPCAQVFG 186

Query: 197 APQAGISFDERYLALPLQRDERALRTMLKRALPLTILQYRRDRLLGQRVRELLRSRASEA 256
           AP + + F  RYL LPL +DER L+  L+R+    + +      L  ++R LL    S  
Sbjct: 187 APNSSLVFPARYLNLPLLQDERTLKHFLERSPADLLSRPDEGDSLSSQLRRLLSRDRSPW 246

Query: 257 TTAEALAGLLNVSGRTLHRQLHEEGTSLQTLKNEVRHELAVELLRRTTRPIKQVALAVGF 316
              EA+A  L++S +TL R L EEGTS Q LK+E+R ++A+  L R    ++++A  +GF
Sbjct: 247 PDLEAVAQHLHISPQTLRRHLREEGTSFQALKDELRRDIAIYHLGRADLSLQEIAEQLGF 306

Query: 317 RNEKSFSRAFLQWTGHAPRDFR 338
               +F RAF +WTG  P  +R
Sbjct: 307 SEPSAFHRAFKKWTGLTPGAYR 328