Pairwise Alignments

Query, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 338 a.a., AraC-type DNA-binding domain-containing proteins from Variovorax sp. SCN45

 Score =  153 bits (386), Expect = 7e-42
 Identities = 109/331 (32%), Positives = 158/331 (47%), Gaps = 5/331 (1%)

Query: 11  RAVTPMAFVRAIVQGYERY--GVDPAEALKAAQITPRELARPGARVTAAQFEALSEHAMQ 68
           RA  P++F+R ++ G  R     D       A I+P  L +  ARVT  QF  + E    
Sbjct: 4   RATVPVSFLRDMLTGARRQLRAQDIDAIATQAGISPLLLRQGAARVTREQFVRMYEGVAL 63

Query: 69  ELDDEALGWFSRRLPWGSYGMLCRASLTSPDLGVAIKRWCRHHRLLTDDIGLALEVAGGV 128
            + DE LG +SR +  G+   L  + L +P L VA+ R+ R   LL DD  L +  A GV
Sbjct: 64  FMGDEMLGLWSRPIRAGALKYLGLSLLDAPSLMVAMYRFTRFWNLLLDDYRLRMARANGV 123

Query: 129 ATLRITENRPLDDAF-REFCLVTSLRFMHGYMCWAIDSRISLRSASFPFAAPPHSDAYAP 187
           AT+ I     LD      F     ++ +HG   W +  ++ +    F F  P   D YA 
Sbjct: 124 ATVTIAPR--LDGTTPTPFGHELMVKLIHGVASWLVGRQLPVLEVGFAFRRPARFDEYAN 181

Query: 188 MFTPEVRFDAPQAGISFDERYLALPLQRDERALRTMLKRALPLTILQYRRDRLLGQRVRE 247
           +F   VRF    + +SF E  L    +R    L   ++RA    I            VR+
Sbjct: 182 LFPGPVRFGQAASSVSFSEAVLRQTFRRTRGELLDFVRRAPDDWIFVTFDHDTTRSSVRD 241

Query: 248 LLRSRASEATTAEALAGLLNVSGRTLHRQLHEEGTSLQTLKNEVRHELAVELLRRTTRPI 307
            + +R +   T    A  L++S R L R+L  EGTS + +K EVR ++A++ L +T  PI
Sbjct: 242 FVAARLATGVTLGDAATSLHMSERALSRKLASEGTSFRAVKEEVRRDVAIQRLVKTREPI 301

Query: 308 KQVALAVGFRNEKSFSRAFLQWTGHAPRDFR 338
             +A +VGF N  +F RAF  WTG  PR +R
Sbjct: 302 DLIAASVGFDNTPAFHRAFRTWTGSTPRGYR 332