Pairwise Alignments

Query, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 356 a.a., transcriptional regulator, ornithine utilization from Pseudomonas putida KT2440

 Score =  114 bits (284), Expect = 5e-30
 Identities = 102/330 (30%), Positives = 153/330 (46%), Gaps = 10/330 (3%)

Query: 13  VTPMAFVRAIVQGYERYGVDPAEALKAAQITPRELARPGARVTAAQFEALSEHAMQELDD 72
           +T +  V  I+  ++  G + +  L  + I P +L    AR+T  Q   +  +A+   +D
Sbjct: 32  LTTLNAVSLILNVFQADGCEASALLAGSGIGPADLGHADARITTQQELQVCANAVARRED 91

Query: 73  EALGWFSRRLPWGSYGMLCRASLTSPDLGVAIKRWCRHHRLLTDDIGLALEVAGGVATLR 132
             L    +R+    YGML  A L+S  LG A++   ++  LL     L L   G      
Sbjct: 92  IGLE-LGQRMRVSCYGMLGYALLSSATLGDALRLALQYPALLGTVFKLRLLDDGQRVWFS 150

Query: 133 ITE--NRPLDDAFR-EFCLVTSLRFMHGYMCWAIDSRISLRSASFPFAAPPHSDAYAPMF 189
            ++  + P   AF  EFCLV SL+ +   +   +   + L  A F    P +   YA  F
Sbjct: 151 ASDYQDSPALSAFNAEFCLV-SLKVICDDL---LGRPLPLLGARFEHPRPGYHALYAGAF 206

Query: 190 TPEVRFDAPQAGISFDERYLALPLQ-RDERALRTMLKRALPLTILQYRRDRLLGQRVREL 248
              + F A     +F+ R+L +PL   D    + M +R   L +    R   LG R+R+L
Sbjct: 207 QCPIGFAAEDNAFAFERRWLDMPLPLADPITHKAMSERCRRLNLEFTGRQAWLG-RIRQL 265

Query: 249 LRSRASEATTAEALAGLLNVSGRTLHRQLHEEGTSLQTLKNEVRHELAVELLRRTTRPIK 308
           L  +   A   E LA  +N S RTL R L   G+S Q L +E+R E A +LL     PI 
Sbjct: 266 LAQQLDAAPGLEGLARQMNCSSRTLRRHLQALGSSYQQLLDELRFERAKQLLADEQMPIY 325

Query: 309 QVALAVGFRNEKSFSRAFLQWTGHAPRDFR 338
           ++A  +GF    SF  AF +W+G AP  FR
Sbjct: 326 RIAETLGFSETASFRHAFQRWSGVAPSHFR 355