Pairwise Alignments

Query, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 93.2 bits (230), Expect = 9e-24
 Identities = 84/329 (25%), Positives = 139/329 (42%), Gaps = 6/329 (1%)

Query: 16  MAFVRAIVQGYERYGVDPAEALKAAQITPRELARPGARVTAAQFEALSEHAMQELDDEAL 75
           + FV+ + +     G DP   L+   +    L+  GAR++  ++  +   A++   + AL
Sbjct: 13  VGFVQPLSEALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSGEAAL 72

Query: 76  GWFSRRLPWGSY-GMLCRASLTSPDLGVAIKRWCRHHRLLTDDIG--LALEVAGGVATLR 132
           G    RL   ++ G+    +  +P LG A +   R   L   +       E     A LR
Sbjct: 73  GLRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEEDAQGAWLR 132

Query: 133 ITENRPLDDAFREFCLVTSLRFMHGYMCWAIDSRISLRSASFPFAAPPHSDAYAPMFTPE 192
                P +D +  F + + L      +     + +        FAAP ++  Y P+ +  
Sbjct: 133 FYSISPYND-YNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQPLCSTP 191

Query: 193 VRFDAPQAGISFDERYLALPLQRDERALRTMLKRALPLTILQYRRDRLLGQRVRELLRS- 251
           V+F A    +      L L       +    L +     +LQ  R R LG+R+  LL   
Sbjct: 192 VQFAADGNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERITHLLGPL 251

Query: 252 -RASEATTAEALAGLLNVSGRTLHRQLHEEGTSLQTLKNEVRHELAVELLRRTTRPIKQV 310
                    E +A  L +   TL R+L EEGT  + L NE R +LA   +R T     ++
Sbjct: 252 LNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALAFGEI 311

Query: 311 ALAVGFRNEKSFSRAFLQWTGHAPRDFRQ 339
           A  +GF + ++F RAF +WTG  P +FR+
Sbjct: 312 AYLLGFASAEAFQRAFKRWTGLTPGEFRR 340