Pairwise Alignments

Query, 791 a.a., Transcription accessory protein (S1 RNA-binding domain) from Variovorax sp. SCN45

Subject, 777 a.a., Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) from Variovorax sp. SCN45

 Score = 70.1 bits (170), Expect = 4e-16
 Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 6/110 (5%)

Query: 666 ADLKEGMILEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVNDAREVVKTGDIVKVKV 725
           A+++ G + EG V+ +  FGA ++L   +DGL+H+SQ++H+ V    + +  G IVKVKV
Sbjct: 619 AEVEIGKVYEGPVTKILDFGALINLLPGKDGLLHISQIAHERVEKVTDYLSEGQIVKVKV 678

Query: 726 MEVDVARKRIGLSMK-LDAAPARRD----GPRDNRFEGAGRGQQQQGRRD 770
           +E D  + R+ LSMK L   PA  +     PR++R +   RG +++ R D
Sbjct: 679 LETD-EKGRVKLSMKALTERPAGMEFSERPPREDRGDRGDRGGERRERSD 727



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 2   QKIIRQLAAEIKVGENQVKAAVELLDGGATVPFIARYRKEATDGLDDTQLRELEARLSYL 61
           +K I Q+ AE+++G+       ++LD GA +  +    K+    +       +E    YL
Sbjct: 611 KKRIEQITAEVEIGKVYEGPVTKILDFGALINLLP--GKDGLLHISQIAHERVEKVTDYL 668

Query: 62  RELEDRRVAVLKAIDEQGKLTPELRAAIE 90
            E +  +V VL+  DE+G++   ++A  E
Sbjct: 669 SEGQIVKVKVLET-DEKGRVKLSMKALTE 696