Pairwise Alignments

Query, 791 a.a., Transcription accessory protein (S1 RNA-binding domain) from Variovorax sp. SCN45

Subject, 720 a.a., polyribonucleotide nucleotidyltransferase from Magnetospirillum magneticum AMB-1

 Score = 62.8 bits (151), Expect = 6e-14
 Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)

Query: 665 IADLKEGMILEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVNDAREVVKTGDIVKVK 724
           +A+ + G+I  G V  V  FGAFV+    +DGLVH+S+L+ + V    +VVK GD+VKVK
Sbjct: 617 VAEPELGVIYNGKVVKVVDFGAFVNFLGSRDGLVHISELARERVAKTADVVKQGDVVKVK 676

Query: 725 VMEVDVARKRIGLSMK 740
           V+  D  R ++ LSMK
Sbjct: 677 VLGFD-DRGKVKLSMK 691



 Score = 29.6 bits (65), Expect = 6e-04
 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 19/102 (18%)

Query: 635 VKDILGELEKPGRDPRPDFKVARFNDGVDDIA-DLKEGMILEGTVSNVAQFGAFVDLGVH 693
           + DILG+ +  G     DFKVA   DGV  +  D+K   I E  +         + LG  
Sbjct: 479 LSDILGDEDHLGD---MDFKVAGTVDGVTALQMDIKITSITEEIMK--------IALGQA 527

Query: 694 QDGLVHVSQLSHKFVNDAREVVK-------TGDIVKVKVMEV 728
           +DG +H+    +K ++ AR+ V        T  I K K+ EV
Sbjct: 528 KDGRIHILGEMNKGLDHARDSVSGNAPRITTISIPKEKIREV 569