Pairwise Alignments

Query, 791 a.a., Transcription accessory protein (S1 RNA-binding domain) from Variovorax sp. SCN45

Subject, 592 a.a., Ribosomal protein S1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 63.5 bits (153), Expect = 3e-14
 Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)

Query: 667 DLKEGMILEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVNDAREVVKTGDIVKVKVM 726
           +L++G +LEG + N+  FG F+DLG   DGL+H++ +S   +N   EV+   D V+V V+
Sbjct: 207 NLEKGQVLEGVIKNMTNFGVFIDLG-GVDGLLHITDISWGRINHPEEVLNLDDKVQVVVL 265

Query: 727 EVDVARKRIGLSMK 740
           + D  +KRI L MK
Sbjct: 266 DFDDDKKRISLGMK 279



 Score = 52.4 bits (124), Expect = 7e-11
 Identities = 25/76 (32%), Positives = 49/76 (64%), Gaps = 1/76 (1%)

Query: 666 ADLKEGMILEGTVSNVAQFGAFVDLGVHQDGLVHVSQLS-HKFVNDAREVVKTGDIVKVK 724
           A+L+ G  ++G + NVA +GAF++L    +GL+HVS++S  + + +  + VK GD ++  
Sbjct: 291 AELEVGSKVKGKIVNVADYGAFLELAPGVEGLIHVSEMSWSQHLRNPADFVKVGDEIEAV 350

Query: 725 VMEVDVARKRIGLSMK 740
           V+ +D   +++ L +K
Sbjct: 351 VLTLDKEERKMSLGIK 366



 Score = 51.2 bits (121), Expect = 2e-10
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 675 EGTVSNVAQFGAFVDLGVHQDGLVHVSQLS-HKFVNDAREVVKTGDIVKVKVMEVDVARK 733
           +G V N+  FG F++L    DGLVHVS LS  K +    E VK  D ++V V+E+DV  +
Sbjct: 389 QGVVRNLTNFGLFLELEEGIDGLVHVSDLSWTKKIKHPSEYVKVNDELEVVVLELDVDNR 448

Query: 734 RIGLSMK 740
           R+ L  K
Sbjct: 449 RLALGHK 455



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 663 DDIADLKEGMILEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVNDAREVVKTGDIVK 722
           + + ++ E  +++GTV  +      +++G   DGLV  ++       D  + +K GD V+
Sbjct: 35  ETLTEISEKEVIKGTVVGINDKDVIINIGFKSDGLVPRTEF-----RDLPD-LKIGDEVE 88

Query: 723 VKVMEVDVARKRIGLSMK 740
           + + E + A  ++ LS K
Sbjct: 89  LFIEEQENALGQLVLSRK 106