Pairwise Alignments

Query, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 375 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas simiae WCS417

 Score =  484 bits (1247), Expect = e-141
 Identities = 244/375 (65%), Positives = 299/375 (79%)

Query: 1   MLLNADQEAIRDAVRDFSQAELWPNAPKWDREHSFPKEAHQGLAALGAYGICVPEEHGGA 60
           ML N +Q  I DA R F+Q  L P A +WDREH FPKEA   +A LG +G+ VPE+ GG 
Sbjct: 1   MLPNEEQLQISDAARQFAQERLKPFAAEWDREHRFPKEAIGEMAELGFFGMLVPEQWGGC 60

Query: 61  GLDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKKQWLEPLAQGKMLGA 120
              YL  A+ LEEIAAGDG  ST +SV N      ++++GN QQK+Q+L+PLA G MLGA
Sbjct: 61  DTGYLAYAMALEEIAAGDGACSTIMSVHNSVGCVPVLKFGNDQQKEQFLKPLASGAMLGA 120

Query: 121 FCLTEPQAGSDASSLRTTARKDGDAYVIDGVKQFITSGKNGQVAIVIAVTDKGAGKRGMS 180
           F LTEPQAGSDASSL+T AR +GD YV++G KQFITSG+N  V IV AVTD  AGKRG+S
Sbjct: 121 FALTEPQAGSDASSLKTRARLEGDHYVLNGCKQFITSGQNAGVVIVFAVTDPAAGKRGIS 180

Query: 181 AFLVPTDAPGYNVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGYKIALGALEGG 240
           AF+VPTD+PGY+VAR+EDKLGQH+SDT QI F+  ++PV N +G EGEGYKIAL  LEGG
Sbjct: 181 AFIVPTDSPGYSVARVEDKLGQHASDTCQILFEDVKVPVANRLGEEGEGYKIALANLEGG 240

Query: 241 RIGIAAQSVGMARSAFDVALAYAKERQAFGGSIFDQQAVGFRLAECATQLEAARQLIWHA 300
           R+GIA+Q+VGMAR+AF+ A  YA+ER++FG  I + QAV FRLA+ ATQ+  ARQ++ +A
Sbjct: 241 RVGIASQAVGMARAAFEAARDYARERESFGKPIIEHQAVAFRLADMATQIAVARQMVHYA 300

Query: 301 AALRDAGRPCLKEAAMAKLFASEMAERVCSAAIQTLGGYGYVNDFPLERIYRDVRVCQIY 360
           AALRD+G+P L EA+MAKLFASEMAE+VCSAA+QTLGGYGY++DFPLERIYRDVRVCQIY
Sbjct: 301 AALRDSGKPALVEASMAKLFASEMAEKVCSAALQTLGGYGYLSDFPLERIYRDVRVCQIY 360

Query: 361 EGTSDIQKLLIQRAL 375
           EGTSDIQ+++I R L
Sbjct: 361 EGTSDIQRMVISRNL 375