Pairwise Alignments

Query, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 384 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) from Variovorax sp. SCN45

 Score =  310 bits (794), Expect = 4e-89
 Identities = 175/374 (46%), Positives = 232/374 (62%), Gaps = 3/374 (0%)

Query: 3   LNADQEAIRDAVRDFSQAELWPNAPKWDREHSFPKEAHQGLAALGAYGICVPEEHGGAGL 62
           L+ +Q A     RDF+QAE  P+A +WD E  FPKEA      LG  G+  PE  GG GL
Sbjct: 5   LSEEQNAFAQTARDFAQAEFAPHAAQWDAEAFFPKEAIAKAGELGFCGLYAPERIGGLGL 64

Query: 63  DYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKKQWLEPLAQGKMLGAFC 122
             L  ALV EE+AA D  T+  I++ N     +L  +      +QW E L  G+ L ++C
Sbjct: 65  PRLDSALVFEEMAAVDPSTTAFITIHNM-ATWMLGTWATDAVAQQWGEELTSGRKLASYC 123

Query: 123 LTEPQAGSDASSLRTTARKDGDAYVIDGVKQFITSGKNGQVAIVIAVTDKGAGKRGMSAF 182
           LTEP AGSDA SL+T A   G  YVI+G K FI+   +  V +++A T  GAG  G+SAF
Sbjct: 124 LTEPGAGSDAGSLKTRAELQGAEYVINGGKAFISGAGSTDVLVLMARTG-GAGASGISAF 182

Query: 183 LVPTDAPGYNVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGYKIALGALEGGRI 242
            VP DAPG +  + E K+G +S  T  INFD  RIP +NL+G EGEG++IA+  L+GGRI
Sbjct: 183 AVPADAPGISYGKKEHKMGWNSQPTRTINFDNVRIPAQNLLGKEGEGFRIAMKGLDGGRI 242

Query: 243 GIAAQSVGMARSAFDVALAYAKERQAFGGSIFDQQAVGFRLAECATQLEAARQLIWHAAA 302
            IA  SVG A+ A D A  Y  ERQ FG  +   QA+ F+LA+ AT+L AARQ++  AA+
Sbjct: 243 NIATCSVGAAQGALDAARRYLHERQQFGKPLASFQALQFKLADMATELVAARQMVRLAAS 302

Query: 303 LRDAGR-PCLKEAAMAKLFASEMAERVCSAAIQTLGGYGYVNDFPLERIYRDVRVCQIYE 361
             DAG        AMAK FA++    VC+ A+Q  GGYGY+++FPLER+ RD RV QI E
Sbjct: 303 KLDAGHADASTYCAMAKRFATDAGFNVCNDALQLHGGYGYLSEFPLERLVRDARVHQILE 362

Query: 362 GTSDIQKLLIQRAL 375
           GT++I ++++ R L
Sbjct: 363 GTNEIMRVIVARKL 376