Pairwise Alignments

Query, 306 a.a., Pseudouridine synthase (EC 4.2.1.70), PA2043 type from Variovorax sp. SCN45

Subject, 296 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

 Score =  277 bits (709), Expect = 2e-79
 Identities = 140/278 (50%), Positives = 188/278 (67%), Gaps = 1/278 (0%)

Query: 20  SCVGLPYGPWPTIAEFLIERFPAITREAWLERIAANDVIDEHHVPVTAERRYQSPLRVYY 79
           S + LP GPW T+ + L E FPAI RE WL+RIA   V+D +  P+  +  Y+  L +YY
Sbjct: 14  STLYLPPGPWVTVLDCLCEHFPAIGREHWLDRIARGRVLDINGSPIALDLAYKEGLCIYY 73

Query: 80  YRSLDNEVHIPFEEQVVFRDDQLLVVDKPPFLPVTPTGKYLQQSLLVRLKRKLELDDLVP 139
           +R + NE  IP +E +++ D+ L+V DKP FLPVTP G+Y++Q+LL RL R+L+   LVP
Sbjct: 74  FREVPNEKVIPVQETILYADEHLVVADKPHFLPVTPAGEYVEQTLLRRLIRRLDNPSLVP 133

Query: 140 LHRIDRSTSGLVLFSVRPETRGAYQAMFPERRIDKHYEAVVPWQDGVSSVPATYRSRLVD 199
           LHRIDR T+GLVLFS  P +R AYQ +FP R+IDK YEA+ P    + + P  ++SRLVD
Sbjct: 134 LHRIDRHTAGLVLFSANPASRSAYQQLFPTRQIDKFYEAIAPALPDL-TFPRVHKSRLVD 192

Query: 200 DEHFMRVREEPGEPNSETHIELLAAQGGHALLKLSPVTGRKHQLRVHCQALGMPIVNDPI 259
            E F R++E  G  N+ET +E+   +G      L PVTG+KHQLRVH  ALG  I NDP 
Sbjct: 193 GEPFFRMQEGQGVANTETAVEVREKKGDLWRYGLFPVTGKKHQLRVHMTALGASICNDPF 252

Query: 260 YPVLLPENTDDFDKPLQLLAKSVAFIDPITGEQRRFTS 297
           YP ++ +  DD+  PL+LLA+ V FIDP+TGE+R F S
Sbjct: 253 YPEVIKDAVDDYANPLKLLAQGVRFIDPVTGEERSFRS 290