Pairwise Alignments

Query, 306 a.a., Pseudouridine synthase (EC 4.2.1.70), PA2043 type from Variovorax sp. SCN45

Subject, 332 a.a., LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) from Variovorax sp. SCN45

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 24/217 (11%)

Query: 96  VFRDDQLLVVDKPPFLPVTPTGKYLQQSLLVRLKRKLELDDLVP----LHRIDRSTSGLV 151
           V+ D+ L +VDKP  L V P   +   +LL  L        L+P    +HR+DR TSGL+
Sbjct: 107 VYEDEHLRIVDKPAGLVVHPAPGHWSGTLLNGLLALDPKAALLPRAGIVHRLDRDTSGLM 166

Query: 152 LFSVRPETRGAYQAMFPERRIDKHYEAV--VPWQDGVSSVPATYRSRLVDDEHFMRVR-- 207
           + +    T  A  A+   R + + Y A+   PW    +        R  D  + +R+   
Sbjct: 167 VVARTRATMDAMVALIAAREVKRQYLAIGHKPWVGAAARQVDAPIGR--DPRNRLRMAVV 224

Query: 208 --EEPGEPNSETHIELLAAQGGHALLKLSPVTGRKHQLRVHCQALGMPIVNDPIY----P 261
             E      + T IE L +     +++ +  TGR HQ+RVH  ++G P+V D +Y     
Sbjct: 225 DLERHAGKTARTLIERLDSHSEGCVVRCTLETGRTHQIRVHMASIGHPLVGDALYGGAPA 284

Query: 262 VLLPENTDDFDKPLQLLAKSVAFIDPITGEQRRFTSP 298
           V L            L A  +AF+ P+T E   F SP
Sbjct: 285 VGLSRQA--------LHAFRLAFVHPVTQEPMEFRSP 313