Pairwise Alignments

Query, 306 a.a., Pseudouridine synthase (EC 4.2.1.70), PA2043 type from Variovorax sp. SCN45

Subject, 223 a.a., LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) from Variovorax sp. SCN45

 Score = 86.3 bits (212), Expect = 6e-22
 Identities = 72/219 (32%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 89  IPFEEQVVFRDDQLLVVDKPPFLPVTPTGKYLQQSLLVRLKRKLELDDLVPLHRIDRSTS 148
           +P     V  DD LL  DKP  L   P G+   +   +  +  L+  D + +HR+D  TS
Sbjct: 3   LPAPLHPVHEDDHLLAFDKPAGLLCVP-GRGEDKQDCLSARALLQWPDALIVHRLDMGTS 61

Query: 149 GLVLFSVRPETRGAYQAMFPERRIDKHYEAVV----PWQDGVSSVPATYRSRLVDDEHFM 204
           GLV+ +   E + A  A F ERR+ K YEAVV    P  D  S + A     + D     
Sbjct: 62  GLVVMARGIEMQRALSAAFAERRVHKRYEAVVDGTLPQLDEWSVIDAPL---MADWPRRP 118

Query: 205 RVREEPGEPNSETHIELLAAQGG--------HALLKLSPVTGRKHQLRVHCQALGMPIVN 256
             + +P    S T  + ++A  G        H LL+  P+TGR HQLRVH  ++G PI+ 
Sbjct: 119 LQKIDPAGKPSVTRWKAISAWSGEPASSAATHVLLE--PLTGRSHQLRVHLLSIGHPILG 176

Query: 257 DPIYPVLLPENTDDFDKPLQLLAKSVAFIDPITGEQRRF 295
           D +Y     +        L L A  + F+ P+T E+ RF
Sbjct: 177 DALYGDAALQAR---APRLLLHASELGFVHPVTMEELRF 212