Pairwise Alignments

Query, 306 a.a., Pseudouridine synthase (EC 4.2.1.70), PA2043 type from Variovorax sp. SCN45

Subject, 226 a.a., RNA pseudouridylate synthase from Sphingobium sp. HT1-2

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 9/174 (5%)

Query: 93  EQVVFRDDQLLVVDKPPFLPVTPT--GKYLQQSLLVRLKRKLELDDLVPLHRIDRSTSGL 150
           ++V+F D + +++DKP  LPV     G    ++ L  L    +   L  +HR+DR TSG 
Sbjct: 6   DKVLFIDGEAIILDKPAGLPVDAPRDGSIALENHLASLTFGFQRWPLA-VHRLDRDTSGC 64

Query: 151 VLFSVRPETRGAYQAMFPERRIDKHYEAV---VPWQDGVSSVPATYRSRLVDDEHFMRVR 207
           +L +  P+    + A F    ++K Y AV   VP  D   ++  + +      + +  + 
Sbjct: 65  LLLARNPKAHKRFAAAFEAGTVEKRYVAVLEGVPEADE-GTIALSLKKVSTPSQGWRMIA 123

Query: 208 EEPGEPNSETHIELLAAQGGHALLKLSPVTGRKHQLRVHCQ-ALGMPIVNDPIY 260
            + G+P + TH   LA + G AL+  +P TGR HQ+RVH Q  LG  IV DP+Y
Sbjct: 124 AKAGKP-AVTHWRKLAVKDGRALIAFTPETGRTHQIRVHAQHGLGFGIVGDPVY 176